FFCP PHASE1:Mm9::chr11:60232084..60232110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=246782 | |EntrezGene=246782 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=312 | |MCL_coexpression_id=312 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-125bp_to_ENSMUST00000141987_5end | |association_with_transcript=-125bp_to_ENSMUST00000141987_5end | ||
|cluster_id=chr11:60232084..60232110,- | |||
|description=CAGE_peak_5_at_Atpaf2_5end | |description=CAGE_peak_5_at_Atpaf2_5end | ||
|id=chr11:60232084..60232110,- | |id=chr11:60232084..60232110,- | ||
|ontology_enrichment_celltype=CL:0000075!6.67e-09!7;CL:0000239!1.00e-07!6;CL:0000677!1.00e-07!6;CL:0000212!1.00e-07!6;CL:0000584!1.00e-07!6 | |ontology_enrichment_celltype=CL:0000075!6.67e-09!7;CL:0000239!1.00e-07!6;CL:0000677!1.00e-07!6;CL:0000212!1.00e-07!6;CL:0000584!1.00e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000075,9.06e-13,7;CL:0000682,9.07e-11,3;CL:0000239,6.97e-10,6;CL:0000677,6.97e-10,6;CL:0000584,6.97e-10,6;CL:0000066,6.85e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!4.98e-17!43;UBERON:0005409!6.88e-12!59;UBERON:0000344!1.75e-11!15;UBERON:0001242!4.49e-10!13;UBERON:0000060!4.49e-10!13;UBERON:0001262!4.49e-10!13;UBERON:0004786!4.49e-10!13;UBERON:0000485!8.51e-08!11;UBERON:0004923!5.86e-07!24 | |ontology_enrichment_uberon=UBERON:0000160!4.98e-17!43;UBERON:0005409!6.88e-12!59;UBERON:0000344!1.75e-11!15;UBERON:0001242!4.49e-10!13;UBERON:0000060!4.49e-10!13;UBERON:0001262!4.49e-10!13;UBERON:0004786!4.49e-10!13;UBERON:0000485!8.51e-08!11;UBERON:0004923!5.86e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.53e-38,31;UBERON:0005409,2.04e-26,47;UBERON:0001242,2.28e-09,13;UBERON:0001262,2.28e-09,13;UBERON:0004786,2.28e-09,13;UBERON:0004921,1.23e-08,114;UBERON:0001007,2.03e-08,116;UBERON:0001555,2.03e-08,116;UBERON:0007026,2.03e-08,116;UBERON:0002108,2.42e-08,4;UBERON:0004119,3.28e-08,118;UBERON:0000925,3.28e-08,118;UBERON:0006595,3.28e-08,118;UBERON:0000344,4.87e-08,15;UBERON:0000485,5.03e-08,11 | |||
|phase1_expression=0.160148847104794,3.83872948403297,2.27499619694768,6.65421264875026,5.00895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,4.59385571292016,2.15380998079537,2.15471232685889,1.33016393619462,5.29263272495855,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38024207464033,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,2.21851877085677,3.11329261382818,5.32631753115166,1.89811624617805,12.6818195137488,4.27269854960458,6.56556357735798,5.65395852645448,2.69645822596266,2.16138049874694,4.38110801159608,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,3.20628920292836,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,1.31017538247707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0,1.37147700954166,0.532427418478012,0,0.436039249896986,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,1.16965804222704,0.429742108096597,0,0,0 | |phase1_expression=0.160148847104794,3.83872948403297,2.27499619694768,6.65421264875026,5.00895729946347,0.16787927191189,0.467225281191051,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.22940928106717,4.59385571292016,2.15380998079537,2.15471232685889,1.33016393619462,5.29263272495855,0.443461021310609,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.38024207464033,0,0,0,0,0,0,0.5709193985953,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0.161766849947409,0,0,0,0,0,2.55457055208591,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.180062129805349,0.150704817835715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0.528901133327089,0,0,0.128867461322093,2.21851877085677,3.11329261382818,5.32631753115166,1.89811624617805,12.6818195137488,4.27269854960458,6.56556357735798,5.65395852645448,2.69645822596266,2.16138049874694,4.38110801159608,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0,0,3.20628920292836,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.216010681643603,0,1.31017538247707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44449345560323,0.412070114477788,0.64183841918363,0.252697211763798,0,0.377252682772152,0.468207537349412,0.192075457214608,0.229741875822453,0.476293691283074,0.115884325944855,0.77163688185482,0.412085900803307,0,1.37147700954166,0.532427418478012,0,0.436039249896986,0.282328141245992,0.338458431566706,0.548783918618318,0.526139422875686,0.407412341537585,0.561142271657738,0.118635018124174,0.197008964751127,0,0.154936841185966,0.385813221962283,0,1.16965804222704,0.429742108096597,0,0,0 | ||
|short_description=p5@Atpaf2 | |short_description=p5@Atpaf2 | ||
}} | }} |
Latest revision as of 19:59, 1 October 2015
Short description: | p5@Atpaf2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Atpaf2_5end |
Coexpression cluster: | MCL_coexpression_mm9:312 |
Association with transcript: | -125bp_to_ENSMUST00000141987_5end |
EntrezGene: | Atpaf2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
columnar/cuboidal epithelial cell | 9.06e-13 | 7 |
M cell of gut | 9.07e-11 | 3 |
brush border epithelial cell | 6.97e-10 | 6 |
gut absorptive cell | 6.97e-10 | 6 |
enterocyte | 6.97e-10 | 6 |
epithelial cell | 6.85e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.53e-38 | 31 |
gastrointestinal system | 2.04e-26 | 47 |
intestinal mucosa | 2.28e-09 | 13 |
wall of intestine | 2.28e-09 | 13 |
gastrointestinal system mucosa | 2.28e-09 | 13 |
subdivision of digestive tract | 1.23e-08 | 114 |
digestive system | 2.03e-08 | 116 |
digestive tract | 2.03e-08 | 116 |
primitive gut | 2.03e-08 | 116 |
small intestine | 2.42e-08 | 4 |
endoderm-derived structure | 3.28e-08 | 118 |
endoderm | 3.28e-08 | 118 |
presumptive endoderm | 3.28e-08 | 118 |
mucosa | 4.87e-08 | 15 |
simple columnar epithelium | 5.03e-08 | 11 |