FFCP PHASE1:Mm9::chr4:133899917..133899939,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230810 | |EntrezGene=230810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |MCL_coexpression_id=9 | ||
|TSSclassifier=NA | |||
|UniProt=D3Z5N1 | |UniProt=D3Z5N1 | ||
|association_with_transcript=293bp_to_ENSMUST00000081094,uc008vev.1_5end | |association_with_transcript=293bp_to_ENSMUST00000081094,uc008vev.1_5end | ||
|cluster_id=chr4:133899917..133899939,+ | |||
|description=CAGE_peak_4_at_Slc30a2_5end | |description=CAGE_peak_4_at_Slc30a2_5end | ||
|id=chr4:133899917..133899939,+ | |id=chr4:133899917..133899939,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.53e-09!9;CL:0002251!1.53e-09!9;CL:0000239!1.51e-07!6;CL:0000677!1.51e-07!6;CL:0000212!1.51e-07!6;CL:0000584!1.51e-07!6 | |ontology_enrichment_celltype=CL:0002563!1.53e-09!9;CL:0002251!1.53e-09!9;CL:0000239!1.51e-07!6;CL:0000677!1.51e-07!6;CL:0000212!1.51e-07!6;CL:0000584!1.51e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.69e-08,3;CL:0000239,6.89e-07,6;CL:0000677,6.89e-07,6;CL:0000584,6.89e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.78e-15!15;UBERON:0004923!9.73e-14!24;UBERON:0003135!2.44e-13!15;UBERON:0001242!4.18e-13!13;UBERON:0000060!4.18e-13!13;UBERON:0001262!4.18e-13!13;UBERON:0004786!4.18e-13!13;UBERON:0000160!5.71e-13!43;UBERON:0003101!3.08e-12!16;UBERON:0000079!3.08e-12!16;UBERON:0000473!4.56e-12!14;UBERON:0003133!2.25e-10!24;UBERON:0000991!8.25e-10!18;UBERON:0005564!8.25e-10!18;UBERON:0003350!1.53e-09!9;UBERON:0004808!1.53e-09!9;UBERON:0001277!1.53e-09!9;UBERON:0004176!2.81e-09!17;UBERON:0009196!2.81e-09!17;UBERON:0009117!2.81e-09!17;UBERON:0005156!3.39e-09!26;UBERON:0000990!3.39e-09!26;UBERON:0002369!4.83e-08!7;UBERON:0006858!4.83e-08!7;UBERON:0005409!4.86e-08!59;UBERON:0003064!1.66e-07!14;UBERON:0000485!2.11e-07!11 | |ontology_enrichment_uberon=UBERON:0000344!1.78e-15!15;UBERON:0004923!9.73e-14!24;UBERON:0003135!2.44e-13!15;UBERON:0001242!4.18e-13!13;UBERON:0000060!4.18e-13!13;UBERON:0001262!4.18e-13!13;UBERON:0004786!4.18e-13!13;UBERON:0000160!5.71e-13!43;UBERON:0003101!3.08e-12!16;UBERON:0000079!3.08e-12!16;UBERON:0000473!4.56e-12!14;UBERON:0003133!2.25e-10!24;UBERON:0000991!8.25e-10!18;UBERON:0005564!8.25e-10!18;UBERON:0003350!1.53e-09!9;UBERON:0004808!1.53e-09!9;UBERON:0001277!1.53e-09!9;UBERON:0004176!2.81e-09!17;UBERON:0009196!2.81e-09!17;UBERON:0009117!2.81e-09!17;UBERON:0005156!3.39e-09!26;UBERON:0000990!3.39e-09!26;UBERON:0002369!4.83e-08!7;UBERON:0006858!4.83e-08!7;UBERON:0005409!4.86e-08!59;UBERON:0003064!1.66e-07!14;UBERON:0000485!2.11e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,5.07e-13,15;UBERON:0003101,4.38e-12,16;UBERON:0000079,4.38e-12,16;UBERON:0003064,7.68e-12,14;UBERON:0000473,4.65e-11,14;UBERON:0002369,7.77e-11,7;UBERON:0006858,7.77e-11,7;UBERON:0000344,2.82e-09,15;UBERON:0003133,4.72e-09,24;UBERON:0004176,7.96e-09,17;UBERON:0009196,7.96e-09,17;UBERON:0009117,7.96e-09,17;UBERON:0004923,2.75e-08,24;UBERON:0000991,3.01e-08,18;UBERON:0005564,3.01e-08,18;UBERON:0001301,3.10e-08,3;UBERON:0006555,3.10e-08,3;UBERON:0005103,3.10e-08,3;UBERON:0000083,3.10e-08,3;UBERON:0009201,3.10e-08,3;UBERON:0004819,3.10e-08,3;UBERON:0006553,3.10e-08,3;UBERON:0003074,3.10e-08,3;UBERON:0003060,3.10e-08,3;UBERON:0005156,3.46e-08,26;UBERON:0000990,3.46e-08,26;UBERON:0004871,4.54e-08,3 | |||
|phase1_expression=0,5.23463111459042,11.8299802241279,0.30246421130683,0.500895729946347,1.6787927191189,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,3.99981056983517,3.44113921600755,4.59385571292016,6.46142994238612,7.11055067863434,0.950117097281869,0.252030129759931,2.66076612786366,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,3.71105347662062,0.173485326766136,1.21786191324856,1.61430848079241,1.20578112442098,1.17588707135705,2.38766523526383,4.6967043869531,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.52759045775474,12.1918831197891,49.7863834114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,0.502670417600539,0.994782360205754,1.55971269695296,1.79763881730844,0.432276099749388,0.199141273254367,0,0,0,0,0,0.49095073923223,0.885311519739602,1.18088118383682,2.66897837330337,1.85095745882701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3105782794378,3.58717770196152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.42366414172764,0,0,0,0,0,0,1.45740418314925,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.66183396182839,1.16670713006429,0.904118764344118,0.844780627453891,1.05621514781179,1.69265700297135,2.30690557736564,1.44950472495604,1.44015003128933,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,5.23463111459042,11.8299802241279,0.30246421130683,0.500895729946347,1.6787927191189,3.73780224952841,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,3.99981056983517,3.44113921600755,4.59385571292016,6.46142994238612,7.11055067863434,0.950117097281869,0.252030129759931,2.66076612786366,0,0,0,0.866554859253824,0.332469290716985,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,3.71105347662062,0.173485326766136,1.21786191324856,1.61430848079241,1.20578112442098,1.17588707135705,2.38766523526383,4.6967043869531,0,0.884610551949874,0.161766849947409,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,1.52759045775474,12.1918831197891,49.7863834114339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.05780226665418,0,0,0,0.201683524623343,0.444756087689741,0.570676878337677,0,0.494096864172033,0.502670417600539,0.994782360205754,1.55971269695296,1.79763881730844,0.432276099749388,0.199141273254367,0,0,0,0,0,0.49095073923223,0.885311519739602,1.18088118383682,2.66897837330337,1.85095745882701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3105782794378,3.58717770196152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,0.42366414172764,0,0,0,0,0,0,1.45740418314925,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12738587736838,0.149516546043979,0.66183396182839,1.16670713006429,0.904118764344118,0.844780627453891,1.05621514781179,1.69265700297135,2.30690557736564,1.44950472495604,1.44015003128933,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0.443971906748129,0.358855426437903,0.671538465456314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0,0,0.147198920134397,0.685738504770831,0,0.238436189947321,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p4@Slc30a2 | |short_description=p4@Slc30a2 | ||
}} | }} |
Latest revision as of 12:11, 26 September 2015
Short description: | p4@Slc30a2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Slc30a2_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 293bp_to_ENSMUST00000081094, uc008vev.1_5end |
EntrezGene: | Slc30a2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.69e-08 | 3 |
brush border epithelial cell | 6.89e-07 | 6 |
gut absorptive cell | 6.89e-07 | 6 |
enterocyte | 6.89e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 5.07e-13 | 15 |
male organism | 4.38e-12 | 16 |
male reproductive system | 4.38e-12 | 16 |
intermediate mesoderm | 7.68e-12 | 14 |
testis | 4.65e-11 | 14 |
adrenal gland | 7.77e-11 | 7 |
adrenal/interrenal gland | 7.77e-11 | 7 |
mucosa | 2.82e-09 | 15 |
reproductive organ | 4.72e-09 | 24 |
external genitalia | 7.96e-09 | 17 |
indifferent external genitalia | 7.96e-09 | 17 |
indifferent gonad | 7.96e-09 | 17 |
organ component layer | 2.75e-08 | 24 |
gonad | 3.01e-08 | 18 |
gonad primordium | 3.01e-08 | 18 |
epididymis | 3.10e-08 | 3 |
excretory tube | 3.10e-08 | 3 |
mesonephric epithelium | 3.10e-08 | 3 |
mesonephric tubule | 3.10e-08 | 3 |
nephric duct | 3.10e-08 | 3 |
kidney epithelium | 3.10e-08 | 3 |
renal duct | 3.10e-08 | 3 |
mesonephric duct | 3.10e-08 | 3 |
pronephric duct | 3.10e-08 | 3 |
reproductive structure | 3.46e-08 | 26 |
reproductive system | 3.46e-08 | 26 |
somatic layer of lateral plate mesoderm | 4.54e-08 | 3 |