FFCP PHASE1:Mm9::chr18:37501369..37501382,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=93878 | |EntrezGene=93878 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3138 | |MCL_coexpression_id=3138 | ||
|TSSclassifier=NA | |||
|UniProt=Q8CDY9 | |UniProt=Q8CDY9 | ||
|association_with_transcript=13bp_to_ENSMUST00000053037,NM_053132,uc008eps.1_5end | |association_with_transcript=13bp_to_ENSMUST00000053037,NM_053132,uc008eps.1_5end | ||
|cluster_id=chr18:37501369..37501382,+ | |||
|description=CAGE_peak_1_at_Pcdhb7_5end | |description=CAGE_peak_1_at_Pcdhb7_5end | ||
|id=chr18:37501369..37501382,+ | |id=chr18:37501369..37501382,+ | ||
|ontology_enrichment_celltype=CL:0000540!9.34e-08!33;CL:0000047!9.34e-08!33;CL:0000031!9.34e-08!33;CL:0000404!9.34e-08!33;CL:0000117!2.47e-07!23;CL:0000337!2.47e-07!23;CL:0000393!3.95e-07!39;CL:0000211!3.95e-07!39 | |ontology_enrichment_celltype=CL:0000540!9.34e-08!33;CL:0000047!9.34e-08!33;CL:0000031!9.34e-08!33;CL:0000404!9.34e-08!33;CL:0000117!2.47e-07!23;CL:0000337!2.47e-07!23;CL:0000393!3.95e-07!39;CL:0000211!3.95e-07!39 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.00e-17!71;UBERON:0003075!3.00e-17!71;UBERON:0007284!3.00e-17!71;UBERON:0003056!1.92e-16!49;UBERON:0000033!7.35e-16!63;UBERON:0001049!8.13e-16!52;UBERON:0005068!8.13e-16!52;UBERON:0006241!8.13e-16!52;UBERON:0007135!8.13e-16!52;UBERON:0001017!3.68e-15!73;UBERON:0005743!3.68e-15!73;UBERON:0000073!8.83e-15!75;UBERON:0001016!8.83e-15!75;UBERON:0004121!1.15e-14!102;UBERON:0000924!1.15e-14!102;UBERON:0006601!1.15e-14!102;UBERON:0003080!1.21e-13!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0000955!3.97e-13!50;UBERON:0006238!3.97e-13!50;UBERON:0002020!1.36e-12!34;UBERON:0002616!1.65e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000468!1.35e-08!333;UBERON:0004111!7.21e-08!122;UBERON:0000025!1.16e-07!114;UBERON:0000153!2.79e-07!94;UBERON:0000956!7.41e-07!21;UBERON:0001869!7.41e-07!21;UBERON:0000203!7.41e-07!21 | |ontology_enrichment_uberon=UBERON:0002346!3.00e-17!71;UBERON:0003075!3.00e-17!71;UBERON:0007284!3.00e-17!71;UBERON:0003056!1.92e-16!49;UBERON:0000033!7.35e-16!63;UBERON:0001049!8.13e-16!52;UBERON:0005068!8.13e-16!52;UBERON:0006241!8.13e-16!52;UBERON:0007135!8.13e-16!52;UBERON:0001017!3.68e-15!73;UBERON:0005743!3.68e-15!73;UBERON:0000073!8.83e-15!75;UBERON:0001016!8.83e-15!75;UBERON:0004121!1.15e-14!102;UBERON:0000924!1.15e-14!102;UBERON:0006601!1.15e-14!102;UBERON:0003080!1.21e-13!40;UBERON:0002780!1.49e-13!39;UBERON:0001890!1.49e-13!39;UBERON:0006240!1.49e-13!39;UBERON:0000955!3.97e-13!50;UBERON:0006238!3.97e-13!50;UBERON:0002020!1.36e-12!34;UBERON:0002616!1.65e-12!49;UBERON:0002791!1.90e-10!29;UBERON:0003528!1.90e-10!29;UBERON:0001893!1.90e-10!29;UBERON:0000468!1.35e-08!333;UBERON:0004111!7.21e-08!122;UBERON:0000025!1.16e-07!114;UBERON:0000153!2.79e-07!94;UBERON:0000956!7.41e-07!21;UBERON:0001869!7.41e-07!21;UBERON:0000203!7.41e-07!21 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,4.72e-22,64;UBERON:0003075,4.72e-22,64;UBERON:0007284,4.72e-22,64;UBERON:0003056,6.83e-20,49;UBERON:0001049,1.21e-19,52;UBERON:0005068,1.21e-19,52;UBERON:0006241,1.21e-19,52;UBERON:0007135,1.21e-19,52;UBERON:0010371,1.64e-18,73;UBERON:0000955,2.74e-17,47;UBERON:0006238,2.74e-17,47;UBERON:0000073,3.77e-17,54;UBERON:0002780,1.47e-16,39;UBERON:0001890,1.47e-16,39;UBERON:0006240,1.47e-16,39;UBERON:0002616,2.64e-16,46;UBERON:0003080,6.62e-16,40;UBERON:0004121,2.47e-15,95;UBERON:0000924,2.47e-15,95;UBERON:0006601,2.47e-15,95;UBERON:0001017,2.60e-15,73;UBERON:0001016,1.49e-14,75;UBERON:0002020,4.06e-14,34;UBERON:0010314,7.85e-12,92;UBERON:0003528,1.06e-11,29;UBERON:0002791,1.06e-11,29;UBERON:0001893,1.06e-11,29;UBERON:0000025,4.55e-08,114;UBERON:0004111,3.39e-07,122;UBERON:0000956,4.37e-07,21;UBERON:0001869,4.37e-07,21;UBERON:0000203,4.37e-07,21 | |||
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| ||
|short_description=p1@Pcdhb7 | |short_description=p1@Pcdhb7 | ||
}} | }} |
Latest revision as of 05:45, 27 September 2015
Short description: | p1@Pcdhb7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pcdhb7_5end |
Coexpression cluster: | MCL_coexpression_mm9:3138 |
Association with transcript: | 13bp_to_ENSMUST00000053037, NM_053132, uc008eps.1_5end |
EntrezGene: | Pcdhb7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 4.72e-22 | 64 |
neural plate | 4.72e-22 | 64 |
presumptive neural plate | 4.72e-22 | 64 |
pre-chordal neural plate | 6.83e-20 | 49 |
neural tube | 1.21e-19 | 52 |
neural rod | 1.21e-19 | 52 |
future spinal cord | 1.21e-19 | 52 |
neural keel | 1.21e-19 | 52 |
ecto-epithelium | 1.64e-18 | 73 |
brain | 2.74e-17 | 47 |
future brain | 2.74e-17 | 47 |
regional part of nervous system | 3.77e-17 | 54 |
regional part of forebrain | 1.47e-16 | 39 |
forebrain | 1.47e-16 | 39 |
future forebrain | 1.47e-16 | 39 |
regional part of brain | 2.64e-16 | 46 |
anterior neural tube | 6.62e-16 | 40 |
ectoderm-derived structure | 2.47e-15 | 95 |
ectoderm | 2.47e-15 | 95 |
presumptive ectoderm | 2.47e-15 | 95 |
central nervous system | 2.60e-15 | 73 |
nervous system | 1.49e-14 | 75 |
gray matter | 4.06e-14 | 34 |
structure with developmental contribution from neural crest | 7.85e-12 | 92 |
brain grey matter | 1.06e-11 | 29 |
regional part of telencephalon | 1.06e-11 | 29 |
telencephalon | 1.06e-11 | 29 |
tube | 4.55e-08 | 114 |
anatomical conduit | 3.39e-07 | 122 |
cerebral cortex | 4.37e-07 | 21 |
cerebral hemisphere | 4.37e-07 | 21 |
pallium | 4.37e-07 | 21 |