FFCP PHASE1:Hg19::chr2:233877912..233877971,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:233877912..233877971,-
|short_description=p2@NGEF
|description=CAGE_peak_2_at_NGEF_5end
|association_with_transcript=0bp_to_NM_019850,uc002vts.2_5end
|Ent...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25791 | |EntrezGene=25791 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7807 | |HGNC=7807 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5V2 | |UniProt=Q8N5V2 | ||
|association_with_transcript=0bp_to_NM_019850,uc002vts.2_5end | |||
|cluster_id=chr2:233877912..233877971,- | |||
|coexpression_cluster_id=C304 | |||
|description=CAGE_peak_2_at_NGEF_5end | |||
|id=chr2:233877912..233877971,- | |||
|ontology_enrichment_celltype=CL:0000181!3.75e-24!12;CL:0000417!3.75e-24!12;CL:0000668!3.75e-24!12;CL:0000414!3.75e-24!12;CL:0000412!3.75e-24!12;CL:0000182!3.75e-24!12;CL:0000223!1.12e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.07e-32;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.07e-32,12;CL:0000223,3.42e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.02e-34;11!UBERON:0009497;5.87e-29;13!UBERON:0003104;2.26e-17;31!UBERON:0001041;7.17e-12;30!UBERON:0006242;2.66e-07;1!UBERON:0001045;3.10e-07;1 | |||
|ontology_enrichment_disease=DOID:3493!4.42e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;6.06e-13;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.88e-13,2 | |||
|ontology_enrichment_uberon=UBERON:0009856!1.19e-31!26;UBERON:0009854!2.81e-31!23;UBERON:0009497!1.42e-28!25;UBERON:0000015!1.42e-28!25;UBERON:0002423!1.42e-28!25;UBERON:0006235!1.42e-28!25;UBERON:0004161!1.42e-28!25;UBERON:0007499!1.97e-28!25;UBERON:0008835!5.94e-28!22;UBERON:0003894!5.94e-28!22;UBERON:0002107!1.08e-27!19;UBERON:0006925!1.08e-27!19;UBERON:0008836!1.08e-27!19;UBERON:0005409!5.13e-25!35;UBERON:0004921!1.00e-24!129;UBERON:0004185!1.00e-24!129;UBERON:0005057!3.38e-23!26;UBERON:0001007!4.47e-21!155;UBERON:0001555!4.47e-21!155;UBERON:0007026!4.47e-21!155;UBERON:0004119!9.25e-19!169;UBERON:0000925!9.25e-19!169;UBERON:0006595!9.25e-19!169;UBERON:0000160!7.80e-18!27;UBERON:0005172!1.27e-17!55;UBERON:0005173!1.27e-17!55;UBERON:0002365!4.43e-16!31;UBERON:0002330!4.43e-16!31;UBERON:0002417!1.58e-15!61;UBERON:0000916!1.58e-15!61;UBERON:0001041!2.75e-15!98;UBERON:0000077!2.78e-14!130;UBERON:0002368!5.56e-14!35;UBERON:0005177!1.20e-13!107;UBERON:0003929!1.27e-13!54;UBERON:0000949!2.02e-12!45;UBERON:0009569!2.78e-11!113;UBERON:0005911!1.25e-10!82;UBERON:0000059!1.85e-10!11;UBERON:0000466!1.19e-09!126;UBERON:0000481!3.94e-09!347;UBERON:0000945!7.57e-09!8;UBERON:0010039!7.57e-09!8;UBERON:0001155!1.32e-08!9;UBERON:0003104!2.33e-08!238;UBERON:0009142!2.33e-08!238;UBERON:0002108!1.37e-07!14;UBERON:0002530!2.14e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.64e-37;19!UBERON:0006925;2.64e-37;19!UBERON:0002423;3.81e-33;25!UBERON:0005409;4.32e-25;22!UBERON:0002365;1.13e-21;31!UBERON:0002330;1.13e-21;31!UBERON:0000160;4.24e-21;17!UBERON:0002368;4.63e-19;33!UBERON:0004921;2.53e-15;33!UBERON:0000949;3.55e-14;43!UBERON:0000059;6.96e-14;11!UBERON:0005172;1.39e-13;52!UBERON:0005173;1.39e-13;52!UBERON:0001007;1.58e-13;81!UBERON:0002108;3.57e-12;4!UBERON:0001155;2.47e-11;9!UBERON:0002417;2.48e-09;58!UBERON:0000916;2.48e-09;58!UBERON:0001154;3.10e-07;1!UBERON:0001153;3.10e-07;1!UBERON:0009854;3.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.68e-37,19;UBERON:0006925,2.68e-37,19;UBERON:0008836,2.68e-37,19;UBERON:0009854,3.41e-36,23;UBERON:0009497,3.75e-33,25;UBERON:0000015,3.75e-33,25;UBERON:0002423,3.75e-33,25;UBERON:0006235,3.75e-33,25;UBERON:0004161,3.75e-33,25;UBERON:0008835,6.17e-32,22;UBERON:0003894,6.17e-32,22;UBERON:0009856,9.42e-32,26;UBERON:0007499,7.35e-28,25;UBERON:0002365,4.52e-22,31;UBERON:0002330,4.52e-22,31;UBERON:0005409,5.23e-22,25;UBERON:0000160,4.24e-21,17;UBERON:0004921,1.58e-20,118;UBERON:0005172,2.52e-19,54;UBERON:0005173,2.52e-19,54;UBERON:0002368,2.58e-19,35;UBERON:0001007,1.32e-17,145;UBERON:0001555,1.32e-17,145;UBERON:0007026,1.32e-17,145;UBERON:0000949,2.15e-17,45;UBERON:0002417,4.14e-17,60;UBERON:0000916,4.14e-17,60;UBERON:0004119,1.59e-15,160;UBERON:0000925,1.59e-15,160;UBERON:0006595,1.59e-15,160;UBERON:0003929,4.21e-14,54;UBERON:0000059,6.97e-14,11;UBERON:0002108,3.57e-12,4;UBERON:0005177,4.17e-12,101;UBERON:0001155,2.47e-11,9;UBERON:0001041,6.21e-11,87;UBERON:0011216,9.30e-11,223;UBERON:0002530,1.26e-10,59;UBERON:0005911,4.59e-10,82;UBERON:0009569,3.59e-09,112;UBERON:0001154,3.01e-07,1;UBERON:0001153,3.01e-07,1;UBERON:0001045,3.01e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61444331263449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,32.956309053676,40.2959158837827,28.3579155207074,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65544497840867,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1583837730658,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8673340701981,35.2945682368323,20.1639947828096,0,0,0,0,0,0,0,0,0,0,22.9882360492461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,7.89776080535604,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,2.32991899054908,22.2956405929443,20.4391328785293,23.321626173548,9.15375578087164,0,0,0,0,0,0,0,0,0,0,7.88057072991982,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8793725087261,11.9256200020999,0,0,4.61934462287689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59665412356402,0,0,0.739280431085226,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,18.7753604472695,0,0,0,0,0,0,0,0,0,0,60.3501916404127,24.0415516554353,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,8.76403665895821,0,0,0,0,0,25.9223151852546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.61444331263449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,32.956309053676,40.2959158837827,28.3579155207074,0,0.983907508344908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.65544497840867,0,0.165018999841176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.34321646058877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1583837730658,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90709788827869,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0.762760950878299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,27.8673340701981,35.2945682368323,20.1639947828096,0,0,0,0,0,0,0,0,0,0,22.9882360492461,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,7.89776080535604,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,2.32991899054908,22.2956405929443,20.4391328785293,23.321626173548,9.15375578087164,0,0,0,0,0,0,0,0,0,0,7.88057072991982,1.10154635083496,0,0,0,0,0,0,0,0,0,0,0,0,0,17.8793725087261,11.9256200020999,0,0,4.61934462287689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59665412356402,0,0,0.739280431085226,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.65263488203798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66855397145913,18.7753604472695,0,0,0,0,0,0,0,0,0,0,60.3501916404127,24.0415516554353,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,8.76403665895821,0,0,0,0,0,25.9223151852546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NGEF | |||
}} | }} |
Latest revision as of 22:31, 15 September 2015
Short description: | p2@NGEF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NGEF_5end |
Coexpression cluster: | [[Coexpression cluster:C304|]] |
Association with transcript: | 0bp_to_NM_019850, uc002vts.2_5end |
EntrezGene: | NGEF |
HGNC: | 7807 |
UniProt: | Q8N5V2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.07e-32 | 12 |
endodermal cell | 3.42e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.88e-13 | 2 |