FFCP PHASE1:Mm9::chr4:149942925..149942944,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3399 | |MCL_coexpression_id=3399 | ||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:149942925..149942944,+ | |||
|description=CAGE_peak_at_chr4:149942925..149942944,+ | |description=CAGE_peak_at_chr4:149942925..149942944,+ | ||
|id=chr4:149942925..149942944,+ | |id=chr4:149942925..149942944,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.81e-07!9;CL:0002251!4.81e-07!9 | |ontology_enrichment_celltype=CL:0002563!4.81e-07!9;CL:0002251!4.81e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.94e-10,9;CL:0002251,1.94e-10,9;CL:0000239,9.24e-08,6;CL:0000677,9.24e-08,6;CL:0000584,9.24e-08,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!1.25e-13!24;UBERON:0000344!2.10e-10!15;UBERON:0005409!4.75e-10!59;UBERON:0001242!2.12e-09!13;UBERON:0000060!2.12e-09!13;UBERON:0001262!2.12e-09!13;UBERON:0004786!2.12e-09!13;UBERON:0000160!5.10e-09!43;UBERON:0004119!1.98e-08!130;UBERON:0000925!1.98e-08!130;UBERON:0006595!1.98e-08!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0002193!6.80e-08!48;UBERON:0004921!2.16e-07!126;UBERON:0004185!2.16e-07!126;UBERON:0003350!4.81e-07!9;UBERON:0004808!4.81e-07!9;UBERON:0001277!4.81e-07!9 | |ontology_enrichment_uberon=UBERON:0004923!1.25e-13!24;UBERON:0000344!2.10e-10!15;UBERON:0005409!4.75e-10!59;UBERON:0001242!2.12e-09!13;UBERON:0000060!2.12e-09!13;UBERON:0001262!2.12e-09!13;UBERON:0004786!2.12e-09!13;UBERON:0000160!5.10e-09!43;UBERON:0004119!1.98e-08!130;UBERON:0000925!1.98e-08!130;UBERON:0006595!1.98e-08!130;UBERON:0001007!4.47e-08!128;UBERON:0001555!4.47e-08!128;UBERON:0007026!4.47e-08!128;UBERON:0002193!6.80e-08!48;UBERON:0004921!2.16e-07!126;UBERON:0004185!2.16e-07!126;UBERON:0003350!4.81e-07!9;UBERON:0004808!4.81e-07!9;UBERON:0001277!4.81e-07!9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.96e-22,31;UBERON:0005409,2.88e-18,47;UBERON:0004923,3.52e-17,24;UBERON:0000344,7.29e-16,15;UBERON:0001242,3.06e-14,13;UBERON:0001262,3.06e-14,13;UBERON:0004786,3.06e-14,13;UBERON:0003350,1.94e-10,9;UBERON:0004808,1.94e-10,9;UBERON:0001277,1.94e-10,9;UBERON:0000485,4.63e-08,11 | |||
|phase1_expression=0,4.53668029931169,6.82498859084304,9.37639055051173,10.5188103288733,6.5472916045637,2.56973904655078,3.35720640948098,0.140788722151667,0.468129052643987,0,0,1.36960583944965,1.83582845079895,1.66554880907831,2.02475267389826,0,8.51747846467242,6.44437837946972,11.8829102503448,1.19060606211498,1.98581902401771,1.30599894569468,2.87986361028132,3.44113921600755,5.7423196411502,3.01533397311352,4.09395342103189,5.70070258369122,5.54466285471848,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,4.28755648150975,2.92972141515835,2.3440060335714,0.523523743973798,2.35292595212406,4.09827290975067,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,6.71130424230945,1.45072428402269,2.68875039313971,0.257259436035947,0,0,0,0,0,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,2.05530983494308,13.7237078333001,0,0.173485326766136,0,0,0,0.117588707135705,0.376999773989026,20.2699873542187,1.01219549843938,3.5384422077995,0.161766849947409,2.87093973998512,2.42437626567611,0,0,0,7.66371165625774,1.31796636956512,0.599902730993408,0.889491589511453,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,3.4833951770826,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,4.29544417878937,1.85115396664481,0,0.464473343720877,1.41754207454303,1.81515172161008,1.11189021922435,1.33157938278791,3.79623249235609,1.81168850196412,2.5133520880027,1.39269530428806,2.72949721966768,6.29173586057955,2.59365659849633,4.77939055810481,0,0.456994050438915,1.1270773567308,0.610953983535943,0.193952487167626,1.05203729835478,0.822074982615345,4.42830443938806,4.55296310739987,3.82531208157582,0,0.166845105716094,0,0.224862112384854,0.811440485554012,1.20588579876208,0.50925170356284,0.863088412352432,0.324270453550071,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0,0.478364305972461,1.14704320301017,1.72684981865896,0.433947175744535,24.1266054302836,9.24639662491806,4.91764273019036,5.79467167239938,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,1.64970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0.469343416127421,0.847328283455281,3.08739757276947,0.8244312647074,0.161464426695906,0,0,0,4.66369338607761,0,3.41741761595705,0.82554747185289,1.66675074632741,1.31857919903284,4.37421528707281,2.74533807847827,0.339956859987711,0.419854356970974,0.967399816630967,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.358053391334963,0.79472541912506,1.08175904567972,0.886137163047463,0.100966449948148,0.533447646584999,0.403304740547362,0.877120926657772,0.673482891482306,1.40252282617883,0,0.221985953374065,0.0897138566094757,0,0,1.31377732815827,0.36630324853453,0,3.00943262421218,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0,0.436039249896986,0.282328141245992,0.507687647350059,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | |phase1_expression=0,4.53668029931169,6.82498859084304,9.37639055051173,10.5188103288733,6.5472916045637,2.56973904655078,3.35720640948098,0.140788722151667,0.468129052643987,0,0,1.36960583944965,1.83582845079895,1.66554880907831,2.02475267389826,0,8.51747846467242,6.44437837946972,11.8829102503448,1.19060606211498,1.98581902401771,1.30599894569468,2.87986361028132,3.44113921600755,5.7423196411502,3.01533397311352,4.09395342103189,5.70070258369122,5.54466285471848,2.88249663851896,0,0,0,4.33277429626912,3.32469290716985,4.28755648150975,2.92972141515835,2.3440060335714,0.523523743973798,2.35292595212406,4.09827290975067,0,0.125896817975577,0.202753862439029,0,0,0,0,0,0.139986421625363,0,6.71130424230945,1.45072428402269,2.68875039313971,0.257259436035947,0,0,0,0,0,0,0,1.7997994345628,2.96659908770092,2.8419204597844,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0.153606533256243,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.289864488701678,0.860423876981386,0,0,0,0,1.12355536105401,0.170430322578058,0,0,0,0,0,0,0,0.253359865475099,0.505524445014783,2.05530983494308,13.7237078333001,0,0.173485326766136,0,0,0,0.117588707135705,0.376999773989026,20.2699873542187,1.01219549843938,3.5384422077995,0.161766849947409,2.87093973998512,2.42437626567611,0,0,0,7.66371165625774,1.31796636956512,0.599902730993408,0.889491589511453,0.149790639404823,0,0,0,0,0,0.162241263067758,0.101839363850316,3.4833951770826,1.26361379216837,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.568326998791185,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0.146199987425332,0,0.134206418760372,0,0.102904612379284,4.29544417878937,1.85115396664481,0,0.464473343720877,1.41754207454303,1.81515172161008,1.11189021922435,1.33157938278791,3.79623249235609,1.81168850196412,2.5133520880027,1.39269530428806,2.72949721966768,6.29173586057955,2.59365659849633,4.77939055810481,0,0.456994050438915,1.1270773567308,0.610953983535943,0.193952487167626,1.05203729835478,0.822074982615345,4.42830443938806,4.55296310739987,3.82531208157582,0,0.166845105716094,0,0.224862112384854,0.811440485554012,1.20588579876208,0.50925170356284,0.863088412352432,0.324270453550071,0.549122826376163,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,1.29327233116623,0,0.162964976442026,0,0,0,0.238043640886014,0,0.315270288212382,0,0.478364305972461,1.14704320301017,1.72684981865896,0.433947175744535,24.1266054302836,9.24639662491806,4.91764273019036,5.79467167239938,0.160550589987792,0,0,0.504941854408746,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0.178065603667255,0.162886959353576,1.64970122972535,1.32745138339963,0,0.302323556964751,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0.178368817602071,0,0,0.469343416127421,0.847328283455281,3.08739757276947,0.8244312647074,0.161464426695906,0,0,0,4.66369338607761,0,3.41741761595705,0.82554747185289,1.66675074632741,1.31857919903284,4.37421528707281,2.74533807847827,0.339956859987711,0.419854356970974,0.967399816630967,0,0.158167996790568,0,0.216010681643603,0.418176592028937,0.218362563746178,0.404593039154462,0.330613822901344,0,1.16653475962614,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0,0,0.39061315453185,0,0,0,1.26404448251271,0,0.102710957164827,0.25984164595559,0.358053391334963,0.79472541912506,1.08175904567972,0.886137163047463,0.100966449948148,0.533447646584999,0.403304740547362,0.877120926657772,0.673482891482306,1.40252282617883,0,0.221985953374065,0.0897138566094757,0,0,1.31377732815827,0.36630324853453,0,3.00943262421218,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0.320919209591815,0,0.50695859978048,0.188626341386076,0.187283014939765,0.192075457214608,0.114870937911227,0,0,0.38581844092741,0,0.588795680537589,0.685738504770831,0.177475806159338,0,0.436039249896986,0.282328141245992,0.507687647350059,0,0.263069711437843,0.135804113845862,0,0.118635018124174,0.492522411877817,0.409231043169689,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | ||
|short_description=p@chr4:149942925..149942944,+ | |short_description=p@chr4:149942925..149942944,+ | ||
}} | }} |
Latest revision as of 05:25, 5 August 2015
Short description: | p@chr4:149942925..149942944, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:149942925..149942944, + |
Coexpression cluster: | MCL_coexpression_mm9:3399 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.94e-10 | 9 |
epithelial cell of alimentary canal | 1.94e-10 | 9 |
brush border epithelial cell | 9.24e-08 | 6 |
gut absorptive cell | 9.24e-08 | 6 |
enterocyte | 9.24e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.96e-22 | 31 |
gastrointestinal system | 2.88e-18 | 47 |
organ component layer | 3.52e-17 | 24 |
mucosa | 7.29e-16 | 15 |
intestinal mucosa | 3.06e-14 | 13 |
wall of intestine | 3.06e-14 | 13 |
gastrointestinal system mucosa | 3.06e-14 | 13 |
epithelium of mucosa | 1.94e-10 | 9 |
gastrointestinal system epithelium | 1.94e-10 | 9 |
intestinal epithelium | 1.94e-10 | 9 |
simple columnar epithelium | 4.63e-08 | 11 |