FFCP PHASE1:Mm9::chr2:180976660..180976667,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=229003 | |EntrezGene=229003 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=451 | |MCL_coexpression_id=451 | ||
|TSSclassifier=NA | |||
|UniProt=A2AS05 | |UniProt=A2AS05 | ||
|association_with_transcript=0bp_to_ENSMUST00000121484,uc008olp.1_5end | |association_with_transcript=0bp_to_ENSMUST00000121484,uc008olp.1_5end | ||
|cluster_id=chr2:180976660..180976667,- | |||
|description=CAGE_peak_3_at_BC006779_5end | |description=CAGE_peak_3_at_BC006779_5end | ||
|id=chr2:180976660..180976667,- | |id=chr2:180976660..180976667,- | ||
|ontology_enrichment_celltype=CL:0002563!3.49e-08!9;CL:0002251!3.49e-08!9 | |ontology_enrichment_celltype=CL:0002563!3.49e-08!9;CL:0002251!3.49e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,5.71e-18,6;CL:0000677,5.71e-18,6;CL:0000584,5.71e-18,6;CL:0000075,2.63e-15,7;CL:0000066,4.16e-15,25;CL:0002563,9.50e-12,9;CL:0002251,9.50e-12,9;CL:0000223,8.69e-11,20;CL:0000682,1.06e-09,3;CL:0002076,9.21e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003929!4.93e-11!55;UBERON:0000490!1.24e-10!66;UBERON:0004923!1.60e-10!24;UBERON:0004119!1.82e-10!130;UBERON:0000925!1.82e-10!130;UBERON:0006595!1.82e-10!130;UBERON:0000344!3.41e-10!15;UBERON:0001007!9.10e-10!128;UBERON:0001555!9.10e-10!128;UBERON:0007026!9.10e-10!128;UBERON:0001242!1.39e-09!13;UBERON:0000060!1.39e-09!13;UBERON:0001262!1.39e-09!13;UBERON:0004786!1.39e-09!13;UBERON:0004921!3.70e-09!126;UBERON:0004185!3.70e-09!126;UBERON:0002405!1.21e-08!70;UBERON:0005911!1.41e-08!69;UBERON:0003350!3.49e-08!9;UBERON:0004808!3.49e-08!9;UBERON:0001277!3.49e-08!9;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0002107!8.72e-08!22;UBERON:0007499!8.72e-08!22;UBERON:0006925!8.72e-08!22;UBERON:0009497!8.72e-08!22;UBERON:0000015!8.72e-08!22;UBERON:0002423!8.72e-08!22;UBERON:0006235!8.72e-08!22;UBERON:0008835!8.72e-08!22;UBERON:0003894!8.72e-08!22;UBERON:0004161!8.72e-08!22;UBERON:0008836!8.72e-08!22;UBERON:0009854!3.54e-07!23;UBERON:0009856!3.54e-07!23;UBERON:0000160!4.57e-07!43 | |ontology_enrichment_uberon=UBERON:0003929!4.93e-11!55;UBERON:0000490!1.24e-10!66;UBERON:0004923!1.60e-10!24;UBERON:0004119!1.82e-10!130;UBERON:0000925!1.82e-10!130;UBERON:0006595!1.82e-10!130;UBERON:0000344!3.41e-10!15;UBERON:0001007!9.10e-10!128;UBERON:0001555!9.10e-10!128;UBERON:0007026!9.10e-10!128;UBERON:0001242!1.39e-09!13;UBERON:0000060!1.39e-09!13;UBERON:0001262!1.39e-09!13;UBERON:0004786!1.39e-09!13;UBERON:0004921!3.70e-09!126;UBERON:0004185!3.70e-09!126;UBERON:0002405!1.21e-08!70;UBERON:0005911!1.41e-08!69;UBERON:0003350!3.49e-08!9;UBERON:0004808!3.49e-08!9;UBERON:0001277!3.49e-08!9;UBERON:0002365!6.26e-08!25;UBERON:0002330!6.26e-08!25;UBERON:0002107!8.72e-08!22;UBERON:0007499!8.72e-08!22;UBERON:0006925!8.72e-08!22;UBERON:0009497!8.72e-08!22;UBERON:0000015!8.72e-08!22;UBERON:0002423!8.72e-08!22;UBERON:0006235!8.72e-08!22;UBERON:0008835!8.72e-08!22;UBERON:0003894!8.72e-08!22;UBERON:0004161!8.72e-08!22;UBERON:0008836!8.72e-08!22;UBERON:0009854!3.54e-07!23;UBERON:0009856!3.54e-07!23;UBERON:0000160!4.57e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,9.50e-12,9;UBERON:0004808,9.50e-12,9;UBERON:0001277,9.50e-12,9;UBERON:0001242,1.49e-10,13;UBERON:0001262,1.49e-10,13;UBERON:0004786,1.49e-10,13;UBERON:0000490,3.85e-10,66;UBERON:0003929,4.82e-10,55;UBERON:0000485,1.75e-09,11;UBERON:0000344,5.22e-09,15;UBERON:0005911,2.54e-07,69;UBERON:0002107,5.49e-07,22;UBERON:0007499,5.49e-07,22;UBERON:0006925,5.49e-07,22;UBERON:0009497,5.49e-07,22;UBERON:0000015,5.49e-07,22;UBERON:0002423,5.49e-07,22;UBERON:0006235,5.49e-07,22;UBERON:0008835,5.49e-07,22;UBERON:0003894,5.49e-07,22;UBERON:0004161,5.49e-07,22;UBERON:0008836,5.49e-07,22 | |||
|phase1_expression=0,6.63053274514786,2.72999543633722,6.95667686005709,7.01254021924886,1.84667199103079,1.16806320297763,0.903863264091034,1.40788722151667,1.40438715793196,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0.607425802169478,0,1.57731082679119,1.37114433605739,1.27316895539409,0.17008658030214,0,0,0.47997726838022,0.22940928106717,1.72269589234506,4.30761996159075,1.939241094173,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,1.25559489221072,0,1.0470474879476,5.29408339227913,0.683045484958446,0.971020706062307,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,1.8456086666351,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.453429360640713,12.1743085254705,0.860423876981386,0,0,1.94932925234301,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0,0,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0,0.508280908292259,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0.102904612379284,1.65209391491899,1.05780226665418,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.760902504450237,0,0.494096864172033,0.754005626400808,0.596869416123452,1.75467678407208,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0.889357881261447,0,0,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,1.72617682470486,0.972811360650212,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,0.757736633841335,1.4351793081753,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.509935289981566,1.6794174278839,1.24379976423981,0,0,0.203319467126849,0,0,0,0.404593039154462,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,6.63053274514786,2.72999543633722,6.95667686005709,7.01254021924886,1.84667199103079,1.16806320297763,0.903863264091034,1.40788722151667,1.40438715793196,0.171217968225505,0.0797721589953364,0,0.437102012094987,0,0.607425802169478,0,1.57731082679119,1.37114433605739,1.27316895539409,0.17008658030214,0,0,0.47997726838022,0.22940928106717,1.72269589234506,4.30761996159075,1.939241094173,0.380046838912748,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.664938581433969,0.816677425049476,1.25559489221072,0,1.0470474879476,5.29408339227913,0.683045484958446,0.971020706062307,0,0,0.183546752161682,0,0,0,0,0.279972843250725,0,1.8456086666351,0,0,0.257259436035947,0,0.515672092277442,0,0,0,0,0.889294796111139,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0.453429360640713,12.1743085254705,0.860423876981386,0,0,1.94932925234301,1.34408066129201,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,2.33044095282455,0.445326417194474,0,0,0,0,0,0.125666591329675,0.741584903203122,0,0,0,0,0,0,0,0,0.255457055208591,0.359445373517761,0,0.508280908292259,0,0,0,0.173824320192276,0,0,0,0.101839363850316,0.124406970610093,0,0,0,0,0,0,0,0,0.0937017245597288,0.258703370739016,0,0,0,0,0,0,0,0,0,0.772043721344145,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439100230582101,0.134206418760372,0,0.102904612379284,1.65209391491899,1.05780226665418,0.213288250535234,0,0.128867461322093,0,0.444756087689741,0.760902504450237,0,0.494096864172033,0.754005626400808,0.596869416123452,1.75467678407208,0.898819408654221,0.216138049874694,0.597423819763102,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0,0,0.889357881261447,0,0,0.449724224769707,0.202860121388503,0.72353147925725,0.25462585178142,1.72617682470486,0.972811360650212,1.09824565275233,1.43768206527355,1.11642284300551,0.936113019343682,0.757736633841335,1.4351793081753,0,0.369506380333209,0,0,0,0,0,0,0,0,0.221464689648775,0,0.491589944147214,0,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0.775284879504663,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.42366414172764,0,0,0,0,0,0,0,0.18542530201051,0.341741761595705,0,0.185194527369712,0,0.136694227721025,0.228778173206523,0.509935289981566,1.6794174278839,1.24379976423981,0,0,0.203319467126849,0,0,0,0.404593039154462,0,0.26175594198403,0.259229946583586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.15241361331,0.100826185136841,0.292373642219257,0,0.116876902181569,0,0,0,0,0,0.375364950902364,0.183151624267265,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0.0640251524048693,0.17230640686684,0,0,0,0,0,0.685738504770831,0.177475806159338,0,0.145346416632329,0.188218760830661,0,0.182927972872773,0,0,0,0,0.0985044823755635,0,0,0,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p3@BC006779 | |short_description=p3@BC006779 | ||
}} | }} |
Latest revision as of 08:05, 26 September 2015
Short description: | p3@BC006779 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_BC006779_5end |
Coexpression cluster: | MCL_coexpression_mm9:451 |
Association with transcript: | 0bp_to_ENSMUST00000121484, uc008olp.1_5end |
EntrezGene: | BC006779 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 5.71e-18 | 6 |
gut absorptive cell | 5.71e-18 | 6 |
enterocyte | 5.71e-18 | 6 |
columnar/cuboidal epithelial cell | 2.63e-15 | 7 |
epithelial cell | 4.16e-15 | 25 |
intestinal epithelial cell | 9.50e-12 | 9 |
epithelial cell of alimentary canal | 9.50e-12 | 9 |
endodermal cell | 8.69e-11 | 20 |
M cell of gut | 1.06e-09 | 3 |
endo-epithelial cell | 9.21e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 9.50e-12 | 9 |
gastrointestinal system epithelium | 9.50e-12 | 9 |
intestinal epithelium | 9.50e-12 | 9 |
intestinal mucosa | 1.49e-10 | 13 |
wall of intestine | 1.49e-10 | 13 |
gastrointestinal system mucosa | 1.49e-10 | 13 |
unilaminar epithelium | 3.85e-10 | 66 |
gut epithelium | 4.82e-10 | 55 |
simple columnar epithelium | 1.75e-09 | 11 |
mucosa | 5.22e-09 | 15 |
endo-epithelium | 2.54e-07 | 69 |
liver | 5.49e-07 | 22 |
epithelial sac | 5.49e-07 | 22 |
digestive gland | 5.49e-07 | 22 |
epithelium of foregut-midgut junction | 5.49e-07 | 22 |
anatomical boundary | 5.49e-07 | 22 |
hepatobiliary system | 5.49e-07 | 22 |
foregut-midgut junction | 5.49e-07 | 22 |
hepatic diverticulum | 5.49e-07 | 22 |
liver primordium | 5.49e-07 | 22 |
septum transversum | 5.49e-07 | 22 |
liver bud | 5.49e-07 | 22 |