FFCP PHASE1:Mm9::chr11:76414781..76414785,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1992 | |MCL_coexpression_id=1992 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-35bp_to_ENSMUST00000136893_5end | |association_with_transcript=-35bp_to_ENSMUST00000136893_5end | ||
|cluster_id=chr11:76414781..76414785,+ | |||
|description=CAGE_peak_1_at_ENSMUST00000136893_5end | |description=CAGE_peak_1_at_ENSMUST00000136893_5end | ||
|id=chr11:76414781..76414785,+ | |id=chr11:76414781..76414785,+ | ||
|ontology_enrichment_celltype=CL:0000144!1.33e-15!121;CL:0000012!1.33e-15!121;CL:0002371!4.59e-14!118;CL:0000548!1.81e-13!115;CL:0000004!1.81e-13!115;CL:0000255!1.81e-13!115;CL:0000034!6.47e-13!97;CL:0000063!1.46e-11!66;CL:0000723!3.16e-10!91;CL:0000048!3.16e-10!91;CL:0002320!8.73e-08!46;CL:0000134!8.73e-08!46;CL:0002031!1.01e-07!25;CL:0000219!1.05e-07!54;CL:0000988!8.70e-07!32;CL:0002032!8.70e-07!32;CL:0000037!8.70e-07!32;CL:0000566!8.70e-07!32;CL:0000837!8.70e-07!32 | |ontology_enrichment_celltype=CL:0000144!1.33e-15!121;CL:0000012!1.33e-15!121;CL:0002371!4.59e-14!118;CL:0000548!1.81e-13!115;CL:0000004!1.81e-13!115;CL:0000255!1.81e-13!115;CL:0000034!6.47e-13!97;CL:0000063!1.46e-11!66;CL:0000723!3.16e-10!91;CL:0000048!3.16e-10!91;CL:0002320!8.73e-08!46;CL:0000134!8.73e-08!46;CL:0002031!1.01e-07!25;CL:0000219!1.05e-07!54;CL:0000988!8.70e-07!32;CL:0002032!8.70e-07!32;CL:0000037!8.70e-07!32;CL:0000566!8.70e-07!32;CL:0000837!8.70e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000034,2.16e-14,97;CL:0000723,2.60e-11,91;CL:0000048,2.60e-11,91;CL:0002031,5.53e-09,25;CL:0002320,6.97e-09,46;CL:0000134,6.97e-09,46;CL:0000219,1.08e-08,54;CL:0000988,7.05e-08,32;CL:0002032,7.05e-08,32;CL:0000037,7.05e-08,32;CL:0000837,7.05e-08,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!8.73e-08!46 | |ontology_enrichment_uberon=UBERON:0002384!8.73e-08!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.97e-09,46 | |||
|phase1_expression=2.88267924788629,2.79180326111489,2.72999543633722,0,2.00358291978539,3.18970616632591,1.86890112476421,2.58246646883153,6.335492496825,1.87251621057595,10.7867319982068,8.85470964848234,2.05440875917447,2.44777126773193,1.99865857089398,3.44207954562704,3.49780939064073,2.20823515750766,2.4680598049033,3.81950686618227,0.510259740906419,1.88652807281682,3.13439746966722,1.11994695955385,3.21172993494038,1.14846392823004,4.30761996159075,4.30942465371778,2.09025761402011,4.53654233567875,3.76941868114018,2.54012269383853,1.23012957516914,0,9.53210345179206,11.470190529736,11.637653306955,1.25559489221072,3.906676722619,1.0470474879476,0.588231488031014,2.73218193983378,0,1.00717454380462,1.62203089951223,0.550640256485045,4.69434806608824,0.65407546914134,0.878744730937887,1.1665793944457,0.419959264876088,0,1.51004345451963,2.17608642603403,2.35265659399725,1.02903774414379,1.14613375975503,3.09403255366465,1.82084814773638,0,0,2.71075625655306,2.66788438833342,3.5995988691256,2.96659908770092,0.7104801149461,0.599200221036809,2.30530983192933,4.35496371695606,1.35005938331691,0.841299845405528,3.71346279724945,1.10434270475807,0.61245399607477,0.670918297127655,0,0,2.17068474744819,2.15049146558741,1.05509030184155,1.73826522844578,1.04182674111352,1.67509799400829,1.12552522006336,2.59757021220577,0.589257170947335,2.27794689278565,2.42319279572891,9.61722655331437,4.91215140694106,1.73918693221007,3.44169550792555,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0.511290967734173,4.93593408745451,3.88673531961374,4.50698943285378,0,0,0,7.79367747640371,10.387754484479,4.54972000513305,0.45673551887624,0.517875767294343,0.148442139064825,1.90833859442749,0.913396434936424,0.461230994512117,1.05505848386836,0.705532242814229,1.88499886994513,0.494389935468748,1.01219549843938,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0.878342391034642,1.46612694769419,0.255457055208591,8.98613433794402,0.599902730993408,8.38663498682227,0.449371918214468,0.457500602818626,1.7591609295801,0.521472960576829,0.767146371990992,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0.900310649026746,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,0.776110112217047,1.5089759505299,0.945530400839096,0.351902248327898,1.7535658594206,0.278047249225598,1.39300866608867,0.411564272815887,0.398068533636986,0,0.51469581422943,1.70498099637356,0.621377317606506,0.469052119962192,0.720248245844059,1.42046841351126,0.393528463494808,1.54267112887378,2.09280550275367,1.60964040839772,1.40118410840603,1.15191894939436,1.64167464079095,0.972825714550269,1.31579988682799,1.3173006917463,1.07365135008297,0.420579897128254,0.514523061896422,0.330418782983798,0.528901133327089,0.639864751605702,0.464473343720877,0.644337306610467,1.21010114774006,0.667134131534611,0.570676878337677,0.474529061544512,1.15289268306808,1.75934646160189,0.795825888164603,0.38992817423824,0,1.08069024937347,0.398282546508734,1.89667900953082,1.02823661348756,0,0.407302655690628,0.969762435838129,0.701358198903186,0.569128834118316,0.738050739898011,0.627994911365499,0.246794327843601,1.77871576252289,0.83422552858047,1.17935397067922,1.79889689907883,1.21716072833102,2.894125917029,1.01850340712568,1.43848068725405,1.29708181420028,1.37280706594041,0,1.86070473834252,1.24815069245824,1.01031551178845,1.97337154874103,1.92977408545347,0.184753190166605,0.947457058852424,1.14075483509418,0.509235257325564,1.17345124144251,1.34005005953453,0.238043640886014,0.975668239288994,0.315270288212382,0.664394068946325,1.59454768657487,0.81931657357869,0.518054945597687,1.01254341007058,1.50791283939272,2.71952841909355,1.47529281905711,1.37968373152366,0.321101179975584,0.586058432961016,3.11476396215683,1.00988370881749,1.89304931649754,2.73307121007647,0.430846795465598,0.955875191810208,0.891194696329576,1.41538265394416,1.61924280669958,0.876767573733936,1.18586333383957,0,0.283880170416537,1.06839362200353,2.28041743095006,0.494910368917606,2.65490276679926,2.18502572539483,1.209294227859,2.64047111658257,1.47650946440386,0.614870295887855,0.775284879504663,0.727067458955011,1.42598951353889,1.8962205476149,3.16255825724996,3.09406629744561,0.340439605753788,0.540183282093931,1.29358683782755,0.857348140126369,0.886701168211368,0.178368817602071,0.329098041204242,2.43571959291679,1.17335854031855,0.21183207086382,0.882113592219848,0.32977250588296,0.645857706783622,2.0506394475573,0.835606408021955,0.164140899745061,1.45740418314925,0,0.512612642393558,0.206386867963223,1.11116716421827,0.188368457004691,1.0935538217682,1.14389086603261,4.07948231985253,5.17820373597535,3.86959926652387,1.90934123603023,0.632671987162271,1.01659733563424,1.08005340821801,1.25452977608681,0.87345025498471,0.404593039154462,0.247960367176008,0.785267825952089,0.777689839750757,0,0.56369293868419,1.34564891439581,1.32366792365678,0.388902376688095,1.93739735216597,1.01373675294467,0.704143431874524,1.43224823328345,0.314578033277133,0.724752362478018,0.864090018773596,0.632022241256357,1.62180172232131,1.84879722896689,0.909445760844565,1.07416017400489,0.79472541912506,1.32214994471966,0.738447635872886,0.605798699688886,0.304827226619999,0.504130925684203,0.487289403698762,1.25075394132428,0.350630706544707,0.906921534460845,2.88581739386284,6.2799699626633,3.02192309455341,1.15913756419314,0.563047426353546,0.549454872801795,1.50057865355346,1.00314420807073,0,0,0.572895513439397,5.32744865265431,0,0,1.35004500046361,0,0.453142408984205,0,1.3492355185943,0,0.512200817262403,0.972426868273176,1.46729213839588,0.735374033800057,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,0.377252682772152,0.655490552289177,0.384150914429216,0.861532034334199,0,0.579421629724277,4.05109362973781,0.412085900803307,0,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,0.376437521661322,0.676916863133412,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.591026894253381,0,0.154936841185966,0.385813221962283,1.49886346762768,0.467863216890817,0.859484216193193,0.765153328275374,1.98532277207564,0.695603506861264 | |phase1_expression=2.88267924788629,2.79180326111489,2.72999543633722,0,2.00358291978539,3.18970616632591,1.86890112476421,2.58246646883153,6.335492496825,1.87251621057595,10.7867319982068,8.85470964848234,2.05440875917447,2.44777126773193,1.99865857089398,3.44207954562704,3.49780939064073,2.20823515750766,2.4680598049033,3.81950686618227,0.510259740906419,1.88652807281682,3.13439746966722,1.11994695955385,3.21172993494038,1.14846392823004,4.30761996159075,4.30942465371778,2.09025761402011,4.53654233567875,3.76941868114018,2.54012269383853,1.23012957516914,0,9.53210345179206,11.470190529736,11.637653306955,1.25559489221072,3.906676722619,1.0470474879476,0.588231488031014,2.73218193983378,0,1.00717454380462,1.62203089951223,0.550640256485045,4.69434806608824,0.65407546914134,0.878744730937887,1.1665793944457,0.419959264876088,0,1.51004345451963,2.17608642603403,2.35265659399725,1.02903774414379,1.14613375975503,3.09403255366465,1.82084814773638,0,0,2.71075625655306,2.66788438833342,3.5995988691256,2.96659908770092,0.7104801149461,0.599200221036809,2.30530983192933,4.35496371695606,1.35005938331691,0.841299845405528,3.71346279724945,1.10434270475807,0.61245399607477,0.670918297127655,0,0,2.17068474744819,2.15049146558741,1.05509030184155,1.73826522844578,1.04182674111352,1.67509799400829,1.12552522006336,2.59757021220577,0.589257170947335,2.27794689278565,2.42319279572891,9.61722655331437,4.91215140694106,1.73918693221007,3.44169550792555,0,0.539703191637817,0.649776417447669,1.34408066129201,0,0.511290967734173,4.93593408745451,3.88673531961374,4.50698943285378,0,0,0,7.79367747640371,10.387754484479,4.54972000513305,0.45673551887624,0.517875767294343,0.148442139064825,1.90833859442749,0.913396434936424,0.461230994512117,1.05505848386836,0.705532242814229,1.88499886994513,0.494389935468748,1.01219549843938,0,0.485300549842228,0.662524555381181,0.484875253135222,0,0.878342391034642,1.46612694769419,0.255457055208591,8.98613433794402,0.599902730993408,8.38663498682227,0.449371918214468,0.457500602818626,1.7591609295801,0.521472960576829,0.767146371990992,0.20778804455956,0.162241263067758,0.305518091550949,0.870848794270651,1.26361379216837,0.631325567659422,0.780722657776222,0.459804208866946,0.900310649026746,0.30140963567143,0.340182495756639,0.384341160854549,0.374806898238915,0.776110112217047,1.5089759505299,0.945530400839096,0.351902248327898,1.7535658594206,0.278047249225598,1.39300866608867,0.411564272815887,0.398068533636986,0,0.51469581422943,1.70498099637356,0.621377317606506,0.469052119962192,0.720248245844059,1.42046841351126,0.393528463494808,1.54267112887378,2.09280550275367,1.60964040839772,1.40118410840603,1.15191894939436,1.64167464079095,0.972825714550269,1.31579988682799,1.3173006917463,1.07365135008297,0.420579897128254,0.514523061896422,0.330418782983798,0.528901133327089,0.639864751605702,0.464473343720877,0.644337306610467,1.21010114774006,0.667134131534611,0.570676878337677,0.474529061544512,1.15289268306808,1.75934646160189,0.795825888164603,0.38992817423824,0,1.08069024937347,0.398282546508734,1.89667900953082,1.02823661348756,0,0.407302655690628,0.969762435838129,0.701358198903186,0.569128834118316,0.738050739898011,0.627994911365499,0.246794327843601,1.77871576252289,0.83422552858047,1.17935397067922,1.79889689907883,1.21716072833102,2.894125917029,1.01850340712568,1.43848068725405,1.29708181420028,1.37280706594041,0,1.86070473834252,1.24815069245824,1.01031551178845,1.97337154874103,1.92977408545347,0.184753190166605,0.947457058852424,1.14075483509418,0.509235257325564,1.17345124144251,1.34005005953453,0.238043640886014,0.975668239288994,0.315270288212382,0.664394068946325,1.59454768657487,0.81931657357869,0.518054945597687,1.01254341007058,1.50791283939272,2.71952841909355,1.47529281905711,1.37968373152366,0.321101179975584,0.586058432961016,3.11476396215683,1.00988370881749,1.89304931649754,2.73307121007647,0.430846795465598,0.955875191810208,0.891194696329576,1.41538265394416,1.61924280669958,0.876767573733936,1.18586333383957,0,0.283880170416537,1.06839362200353,2.28041743095006,0.494910368917606,2.65490276679926,2.18502572539483,1.209294227859,2.64047111658257,1.47650946440386,0.614870295887855,0.775284879504663,0.727067458955011,1.42598951353889,1.8962205476149,3.16255825724996,3.09406629744561,0.340439605753788,0.540183282093931,1.29358683782755,0.857348140126369,0.886701168211368,0.178368817602071,0.329098041204242,2.43571959291679,1.17335854031855,0.21183207086382,0.882113592219848,0.32977250588296,0.645857706783622,2.0506394475573,0.835606408021955,0.164140899745061,1.45740418314925,0,0.512612642393558,0.206386867963223,1.11116716421827,0.188368457004691,1.0935538217682,1.14389086603261,4.07948231985253,5.17820373597535,3.86959926652387,1.90934123603023,0.632671987162271,1.01659733563424,1.08005340821801,1.25452977608681,0.87345025498471,0.404593039154462,0.247960367176008,0.785267825952089,0.777689839750757,0,0.56369293868419,1.34564891439581,1.32366792365678,0.388902376688095,1.93739735216597,1.01373675294467,0.704143431874524,1.43224823328345,0.314578033277133,0.724752362478018,0.864090018773596,0.632022241256357,1.62180172232131,1.84879722896689,0.909445760844565,1.07416017400489,0.79472541912506,1.32214994471966,0.738447635872886,0.605798699688886,0.304827226619999,0.504130925684203,0.487289403698762,1.25075394132428,0.350630706544707,0.906921534460845,2.88581739386284,6.2799699626633,3.02192309455341,1.15913756419314,0.563047426353546,0.549454872801795,1.50057865355346,1.00314420807073,0,0,0.572895513439397,5.32744865265431,0,0,1.35004500046361,0,0.453142408984205,0,1.3492355185943,0,0.512200817262403,0.972426868273176,1.46729213839588,0.735374033800057,0.222246727801615,0.206035057238894,0.962757628775446,0.252697211763798,0.760437899670719,0.377252682772152,0.655490552289177,0.384150914429216,0.861532034334199,0,0.579421629724277,4.05109362973781,0.412085900803307,0,0.685738504770831,0.70990322463735,0.476872379894642,0.436039249896986,0.376437521661322,0.676916863133412,0.365855945745545,0,0.679020569229309,0,0.474540072496697,0.591026894253381,0,0.154936841185966,0.385813221962283,1.49886346762768,0.467863216890817,0.859484216193193,0.765153328275374,1.98532277207564,0.695603506861264 | ||
|short_description=p1@ENSMUST00000136893 | |short_description=p1@ENSMUST00000136893 | ||
}} | }} |
Latest revision as of 00:30, 4 August 2015
Short description: | p1@ENSMUST00000136893 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000136893_5end |
Coexpression cluster: | MCL_coexpression_mm9:1992 |
Association with transcript: | -35bp_to_ENSMUST00000136893_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
stem cell | 2.16e-14 | 97 |
somatic stem cell | 2.60e-11 | 91 |
multi fate stem cell | 2.60e-11 | 91 |
hematopoietic lineage restricted progenitor cell | 5.53e-09 | 25 |
connective tissue cell | 6.97e-09 | 46 |
mesenchymal cell | 6.97e-09 | 46 |
motile cell | 1.08e-08 | 54 |
hematopoietic cell | 7.05e-08 | 32 |
hematopoietic oligopotent progenitor cell | 7.05e-08 | 32 |
hematopoietic stem cell | 7.05e-08 | 32 |
hematopoietic multipotent progenitor cell | 7.05e-08 | 32 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.97e-09 | 46 |