FFCP PHASE1:Hg19::chr2:27528919..27528940,+: Difference between revisions
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|id=chr2:27528919..27528940,+
|short_description=p@chr2:27528919..27528940,+
|description=CAGE_peak_at_chr2:27528919..27528940,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:27528919..27528940,+ | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr2:27528919..27528940,+ | |||
|id=chr2:27528919..27528940,+ | |||
|ontology_enrichment_celltype=CL:0002535!9.96e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002535;7.67e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.67e-18,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!8.93e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.48e-18;2!DOID:4362;6.13e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,5.48e-18,2;DOID:4362,6.13e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0006834!1.07e-11!1;UBERON:0005409!3.48e-10!35;UBERON:0000160!1.97e-09!27;UBERON:0002108!5.99e-07!14;UBERON:0002294!7.63e-07!7;UBERON:0001173!7.63e-07!7;UBERON:0004912!7.63e-07!7;UBERON:0006955!9.96e-07!2;UBERON:0004801!9.96e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002108;4.63e-27;4!UBERON:0006955;7.67e-18;2!UBERON:0004801;7.67e-18;2!UBERON:0000160;3.69e-17;17!UBERON:0005409;1.31e-13;22!UBERON:0002114;3.24e-12;2!UBERON:0004921;5.58e-08;33!UBERON:0000002;8.02e-07;6!UBERON:0001560;8.02e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002108,4.63e-27,4;UBERON:0006955,7.67e-18,2;UBERON:0004801,7.67e-18,2;UBERON:0000160,3.90e-17,17;UBERON:0002114,3.24e-12,2;UBERON:0005409,4.09e-12,25;UBERON:0000002,8.02e-07,6;UBERON:0001560,8.02e-07,6 | |||
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|short_description=p@chr2:27528919..27528940,+ | |||
}} | }} |
Latest revision as of 09:10, 29 July 2015
Short description: | p@chr2:27528919..27528940, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:27528919..27528940, + |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.67e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
small intestine | 4.63e-27 | 4 |
uterine epithelium | 7.67e-18 | 2 |
cervix epithelium | 7.67e-18 | 2 |
intestine | 3.90e-17 | 17 |
duodenum | 3.24e-12 | 2 |
gastrointestinal system | 4.09e-12 | 25 |
uterine cervix | 8.02e-07 | 6 |
neck of organ | 8.02e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 5.48e-18 | 2 |
cervical cancer | 6.13e-08 | 5 |