FFCP PHASE1:Mm9::chr2:147190749..147190769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18503 | |EntrezGene=18503 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=129 | |MCL_coexpression_id=129 | ||
|TSSclassifier=NA | |||
|UniProt=Q548R5,P09084 | |UniProt=Q548R5,P09084 | ||
|association_with_transcript=19bp_to_ENSMUST00000047382,ENSMUST00000109968,NM_008780,uc008msx.2_5end | |association_with_transcript=19bp_to_ENSMUST00000047382,ENSMUST00000109968,NM_008780,uc008msx.2_5end | ||
|cluster_id=chr2:147190749..147190769,+ | |||
|description=CAGE_peak_1_at_Pax1_5end | |description=CAGE_peak_1_at_Pax1_5end | ||
|id=chr2:147190749..147190769,+ | |id=chr2:147190749..147190769,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006562!2.27e-07!24;UBERON:0001557!2.27e-07!24;UBERON:0001042!2.27e-07!24;UBERON:0008814!2.27e-07!24;UBERON:0009145!2.27e-07!24 | |ontology_enrichment_uberon=UBERON:0006562!2.27e-07!24;UBERON:0001557!2.27e-07!24;UBERON:0001042!2.27e-07!24;UBERON:0008814!2.27e-07!24;UBERON:0009145!2.27e-07!24 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000153,1.89e-11,43;UBERON:0006562,2.42e-11,24;UBERON:0001557,2.42e-11,24;UBERON:0001042,2.42e-11,24;UBERON:0008814,2.42e-11,24;UBERON:0009145,2.42e-11,24;UBERON:0002370,2.55e-10,23;UBERON:0000974,2.55e-10,23;UBERON:0004807,2.55e-10,23;UBERON:0005058,2.55e-10,23;UBERON:0003351,2.55e-10,23;UBERON:0009113,2.55e-10,23;UBERON:0003295,2.55e-10,23;UBERON:0009722,2.55e-10,23;UBERON:0005562,2.55e-10,23;UBERON:0007690,2.55e-10,23;UBERON:0003408,1.06e-09,24;UBERON:0000072,1.53e-09,27;UBERON:0007811,7.68e-09,36;UBERON:0000007,5.64e-08,8;UBERON:0003296,5.64e-08,8;UBERON:0010133,5.64e-08,8;UBERON:0004177,2.76e-07,29;UBERON:0005057,2.76e-07,29;UBERON:0002368,7.13e-07,60 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,10.4091196059682,0,0,0,0,0,0,1.3013942122792,0,0.808834249737046,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,2.99277018814219,0.459804208866946,1.98068342785884,1.35634336052144,0.0680364991513279,0,0.0937017245597288,0,1.94011193639558,2.64748512234947,2.28736461413134,5.04150184583422,0.834141747676794,0.696504333044333,1.23469281844766,2.38841120182192,0,0,0,0,0.938104239924385,0,2.60419209143731,2.16440654922144,0,0,0,0.350296027101508,0.329119699826961,0,0.162137619091711,0,0,0,0,0,0,0,0.426576501070468,0.696710015581316,1.15980715189884,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41084541186873,0.162964976442026,0.169745085775188,0,2.01007508930179,0.476087281772027,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,19.4465981553815,9.44318391614108,8.78781843629528,7.62563004661776,11.4156043265325,6.91105886528908,9.74287837166718,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.603129249281559,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,1.26534397432454,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,36.9733011134969,264.353680738374,216.103853874797,115.49961162726,91.124588094748,53.4452844361603,51.8042387431066,42.5345838262782,35.2372910319035,37.9509897141899,34.3817291316626,31.9661848826388,33.1930853659137,31.5567635890236,28.5680283355166,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8037172286955,8.77854721482268,11.9513524027894,5.59145449257076,12.367176595051,4.59608771125035,1.11123363900808,1.85431551515005,1.92551525755089,1.76888048234658,0.25347929989024,1.13175804831646,1.40462261204824,2.30490548657529,1.60819313075717,1.90517476513229,1.62238056322798,1.73618298417335,1.23625770240992,1.91358596174717,0.342869252385415,2.30718548007139,0.715308569841963,1.30811774969096,1.97629698872194,1.60767754994185,0.73171189149109,2.10455769150274,2.17286582153379,1.68342681497322,1.18635018124174,1.18205378850676,1.22769312950907,1.23949472948773,2.12197272079256,1.74867404556562,2.33931608445408,2.57845264857958,3.82576664137687,1.76473135295612,1.39120701372253 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372798891650601,0.075726193333184,0.0755715601067855,1.73918693221007,0,0,0,0,0,0.983110940922263,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.45673551887624,0,0,10.4091196059682,0,0,0,0,0,0,1.3013942122792,0,0.808834249737046,0.441683036920787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0,2.99277018814219,0.459804208866946,1.98068342785884,1.35634336052144,0.0680364991513279,0,0.0937017245597288,0,1.94011193639558,2.64748512234947,2.28736461413134,5.04150184583422,0.834141747676794,0.696504333044333,1.23469281844766,2.38841120182192,0,0,0,0,0.938104239924385,0,2.60419209143731,2.16440654922144,0,0,0,0.350296027101508,0.329119699826961,0,0.162137619091711,0,0,0,0,0,0,0,0.426576501070468,0.696710015581316,1.15980715189884,0,0,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.41084541186873,0.162964976442026,0.169745085775188,0,2.01007508930179,0.476087281772027,0.195133647857799,0,0,0,0,0,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0,0,0,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,19.4465981553815,9.44318391614108,8.78781843629528,7.62563004661776,11.4156043265325,6.91105886528908,9.74287837166718,0.23467170806371,0,0,0.16488625294148,0.161464426695906,0.603129249281559,0.119372344003136,0.656563598980245,0,0,0,0,0,0,0,0,0,0,0,0,1.26534397432454,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0,0,0.288030006257865,36.9733011134969,264.353680738374,216.103853874797,115.49961162726,91.124588094748,53.4452844361603,51.8042387431066,42.5345838262782,35.2372910319035,37.9509897141899,34.3817291316626,31.9661848826388,33.1930853659137,31.5567635890236,28.5680283355166,0.221985953374065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.8037172286955,8.77854721482268,11.9513524027894,5.59145449257076,12.367176595051,4.59608771125035,1.11123363900808,1.85431551515005,1.92551525755089,1.76888048234658,0.25347929989024,1.13175804831646,1.40462261204824,2.30490548657529,1.60819313075717,1.90517476513229,1.62238056322798,1.73618298417335,1.23625770240992,1.91358596174717,0.342869252385415,2.30718548007139,0.715308569841963,1.30811774969096,1.97629698872194,1.60767754994185,0.73171189149109,2.10455769150274,2.17286582153379,1.68342681497322,1.18635018124174,1.18205378850676,1.22769312950907,1.23949472948773,2.12197272079256,1.74867404556562,2.33931608445408,2.57845264857958,3.82576664137687,1.76473135295612,1.39120701372253 | ||
|short_description=p1@Pax1 | |short_description=p1@Pax1 | ||
}} | }} |
Latest revision as of 20:52, 25 September 2015
Short description: | p1@Pax1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pax1_5end |
Coexpression cluster: | MCL_coexpression_mm9:129 |
Association with transcript: | 19bp_to_ENSMUST00000047382, ENSMUST00000109968, NM_008780, uc008msx.2_5end |
EntrezGene: | Pax1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
anterior region of body | 1.89e-11 | 43 |
pharynx | 2.42e-11 | 24 |
upper respiratory tract | 2.42e-11 | 24 |
chordate pharynx | 2.42e-11 | 24 |
pharyngeal arch system | 2.42e-11 | 24 |
pharyngeal region of foregut | 2.42e-11 | 24 |
thymus | 2.55e-10 | 23 |
neck | 2.55e-10 | 23 |
respiratory system epithelium | 2.55e-10 | 23 |
hemolymphoid system gland | 2.55e-10 | 23 |
pharyngeal epithelium | 2.55e-10 | 23 |
thymic region | 2.55e-10 | 23 |
pharyngeal gland | 2.55e-10 | 23 |
entire pharyngeal arch endoderm | 2.55e-10 | 23 |
thymus primordium | 2.55e-10 | 23 |
early pharyngeal endoderm | 2.55e-10 | 23 |
gland of gut | 1.06e-09 | 24 |
segment of respiratory tract | 1.53e-09 | 27 |
craniocervical region | 7.68e-09 | 36 |
pituitary gland | 5.64e-08 | 8 |
gland of diencephalon | 5.64e-08 | 8 |
neuroendocrine gland | 5.64e-08 | 8 |
hemopoietic organ | 2.76e-07 | 29 |
immune organ | 2.76e-07 | 29 |
endocrine gland | 7.13e-07 | 60 |