FFCP PHASE1:Mm9::chr4:63640895..63640904,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=357 | |MCL_coexpression_id=357 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENSMUST00000141428,uc008thh.1,uc008thi.1,uc008thj.1_5end | |association_with_transcript=7bp_to_ENSMUST00000141428,uc008thh.1,uc008thi.1,uc008thj.1_5end | ||
|cluster_id=chr4:63640895..63640904,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000141428_5end,CAGE_peak_2_at_uc008thh.1_5end,CAGE_peak_2_at_uc008thi.1_5end,CAGE_peak_2_at_uc008thj.1_5end | |description=CAGE_peak_2_at_ENSMUST00000141428_5end,CAGE_peak_2_at_uc008thh.1_5end,CAGE_peak_2_at_uc008thi.1_5end,CAGE_peak_2_at_uc008thj.1_5end | ||
|id=chr4:63640895..63640904,+ | |id=chr4:63640895..63640904,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!1.50e-23!18;UBERON:0005564!1.50e-23!18;UBERON:0005156!2.80e-21!26;UBERON:0000990!2.80e-21!26;UBERON:0004176!5.82e-21!17;UBERON:0009196!5.82e-21!17;UBERON:0009117!5.82e-21!17;UBERON:0003133!5.56e-20!24;UBERON:0000464!4.04e-14!57;UBERON:0000473!5.69e-14!14;UBERON:0003135!5.99e-13!15;UBERON:0003101!4.69e-12!16;UBERON:0000079!4.69e-12!16;UBERON:0000466!1.18e-11!79;UBERON:0002323!3.52e-10!37;UBERON:0004458!3.52e-10!37;UBERON:0003886!7.56e-10!38;UBERON:0000992!1.21e-09!3;UBERON:0002553!1.56e-09!39;UBERON:0000474!3.37e-08!9;UBERON:0002048!3.95e-07!14;UBERON:0000117!3.95e-07!14;UBERON:0000171!3.95e-07!14;UBERON:0000170!3.95e-07!14;UBERON:0005597!3.95e-07!14;UBERON:0000118!3.95e-07!14 | |ontology_enrichment_uberon=UBERON:0000991!1.50e-23!18;UBERON:0005564!1.50e-23!18;UBERON:0005156!2.80e-21!26;UBERON:0000990!2.80e-21!26;UBERON:0004176!5.82e-21!17;UBERON:0009196!5.82e-21!17;UBERON:0009117!5.82e-21!17;UBERON:0003133!5.56e-20!24;UBERON:0000464!4.04e-14!57;UBERON:0000473!5.69e-14!14;UBERON:0003135!5.99e-13!15;UBERON:0003101!4.69e-12!16;UBERON:0000079!4.69e-12!16;UBERON:0000466!1.18e-11!79;UBERON:0002323!3.52e-10!37;UBERON:0004458!3.52e-10!37;UBERON:0003886!7.56e-10!38;UBERON:0000992!1.21e-09!3;UBERON:0002553!1.56e-09!39;UBERON:0000474!3.37e-08!9;UBERON:0002048!3.95e-07!14;UBERON:0000117!3.95e-07!14;UBERON:0000171!3.95e-07!14;UBERON:0000170!3.95e-07!14;UBERON:0005597!3.95e-07!14;UBERON:0000118!3.95e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,6.20e-41,17;UBERON:0009196,6.20e-41,17;UBERON:0009117,6.20e-41,17;UBERON:0000991,1.13e-38,18;UBERON:0005564,1.13e-38,18;UBERON:0000473,5.13e-38,14;UBERON:0003135,1.69e-35,15;UBERON:0003101,2.69e-33,16;UBERON:0000079,2.69e-33,16;UBERON:0003133,4.66e-29,24;UBERON:0005156,7.77e-27,26;UBERON:0000990,7.77e-27,26;UBERON:0002323,6.84e-19,37;UBERON:0004458,6.84e-19,37;UBERON:0003886,2.14e-18,38;UBERON:0002553,6.32e-18,39 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.823120949949934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48549638131936,4.13646226142744,2.91676782516071,2.84151611651008,3.71703476079712,2.8165737274981,1.0416350787516,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0.823120949949934,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995171334092466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,0,0,0,0.157635144106191,0.221464689648775,0.318909537314974,0.163863314715738,0.518054945597687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.11626247103979,0.178065603667255,0.162886959353576,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.48549638131936,4.13646226142744,2.91676782516071,2.84151611651008,3.71703476079712,2.8165737274981,1.0416350787516,0.209718688851422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0.252697211763798,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENSMUST00000141428,p2@uc008thh.1,p2@uc008thi.1,p2@uc008thj.1 | |short_description=p2@ENSMUST00000141428,p2@uc008thh.1,p2@uc008thi.1,p2@uc008thj.1 | ||
}} | }} |
Latest revision as of 16:54, 5 August 2015
Short description: | p2@ENSMUST00000141428, p2@uc008thh.1, p2@uc008thi.1, p2@uc008thj.1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000141428_5end, CAGE_peak_2_at_uc008thh.1_5end, CAGE_peak_2_at_uc008thi.1_5end, CAGE_peak_2_at_uc008thj.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:357 |
Association with transcript: | 7bp_to_ENSMUST00000141428, uc008thh.1, uc008thi.1, uc008thj.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 6.20e-41 | 17 |
indifferent external genitalia | 6.20e-41 | 17 |
indifferent gonad | 6.20e-41 | 17 |
gonad | 1.13e-38 | 18 |
gonad primordium | 1.13e-38 | 18 |
testis | 5.13e-38 | 14 |
male reproductive organ | 1.69e-35 | 15 |
male organism | 2.69e-33 | 16 |
male reproductive system | 2.69e-33 | 16 |
reproductive organ | 4.66e-29 | 24 |
reproductive structure | 7.77e-27 | 26 |
reproductive system | 7.77e-27 | 26 |
body cavity | 6.84e-19 | 37 |
body cavity or lining | 6.84e-19 | 37 |
body cavity precursor | 2.14e-18 | 38 |
anatomical cavity | 6.32e-18 | 39 |