FFCP PHASE1:Mm9::chr18:35931264..35931269,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56550 | |EntrezGene=56550 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=484 | |MCL_coexpression_id=484 | ||
|TSSclassifier=NA | |||
|UniProt=P62838 | |UniProt=P62838 | ||
|association_with_transcript=8bp_to_ENSMUST00000167406_5end | |association_with_transcript=8bp_to_ENSMUST00000167406_5end | ||
|cluster_id=chr18:35931264..35931269,+ | |||
|description=CAGE_peak_8_at_Ube2d2_5end | |description=CAGE_peak_8_at_Ube2d2_5end | ||
|id=chr18:35931264..35931269,+ | |id=chr18:35931264..35931269,+ | ||
|ontology_enrichment_celltype=CL:0000063!5.75e-32!66;CL:0000144!1.12e-21!121;CL:0000012!1.12e-21!121;CL:0000548!8.67e-21!115;CL:0000004!8.67e-21!115;CL:0000255!8.67e-21!115;CL:0002371!5.22e-20!118;CL:0000988!1.15e-18!32;CL:0002032!1.15e-18!32;CL:0000037!1.15e-18!32;CL:0000566!1.15e-18!32;CL:0000837!1.15e-18!32;CL:0002076!3.00e-17!15;CL:0002563!6.65e-17!9;CL:0002251!6.65e-17!9;CL:0000066!1.07e-16!25;CL:0002031!3.79e-16!25;CL:0000838!3.83e-14!12;CL:0000738!5.87e-14!17;CL:0002087!5.87e-14!17;CL:0000075!7.12e-14!7;CL:0000542!6.91e-13!13;CL:0000051!6.91e-13!13;CL:0002320!7.53e-13!46;CL:0000134!7.53e-13!46;CL:0000219!9.41e-13!54;CL:0000239!9.85e-13!6;CL:0000677!9.85e-13!6;CL:0000212!9.85e-13!6;CL:0000584!9.85e-13!6;CL:0000084!2.66e-12!11;CL:0000827!2.66e-12!11;CL:0000791!2.80e-12!9;CL:0000789!2.80e-12!9;CL:0002420!2.80e-12!9;CL:0002419!2.80e-12!9;CL:0000790!2.80e-12!9;CL:0000223!3.46e-12!20;CL:0000893!1.26e-10!6;CL:0002489!1.26e-10!6;CL:0000898!1.26e-10!6;CL:0000809!1.26e-10!6;CL:0000810!1.26e-10!6;CL:0000895!1.26e-10!6;CL:0000808!1.26e-10!6;CL:0000894!1.26e-10!6;CL:0000806!1.26e-10!6;CL:0000807!1.26e-10!6;CL:0000805!1.26e-10!6;CL:0002425!1.26e-10!6;CL:0002436!1.26e-10!6;CL:0002427!1.26e-10!6;CL:0002428!1.26e-10!6;CL:0002429!1.26e-10!6;CL:0002433!1.26e-10!6;CL:0002431!1.26e-10!6;CL:0002432!1.26e-10!6;CL:0000624!1.72e-10!8;CL:0000034!4.30e-09!97;CL:0000049!8.32e-08!19;CL:0000068!6.14e-07!3;CL:0002202!6.14e-07!3;CL:0000069!6.14e-07!3;CL:0002632!6.14e-07!3;CL:0002368!6.14e-07!3;CL:0000307!6.14e-07!3;CL:0000377!6.14e-07!3 | |ontology_enrichment_celltype=CL:0000063!5.75e-32!66;CL:0000144!1.12e-21!121;CL:0000012!1.12e-21!121;CL:0000548!8.67e-21!115;CL:0000004!8.67e-21!115;CL:0000255!8.67e-21!115;CL:0002371!5.22e-20!118;CL:0000988!1.15e-18!32;CL:0002032!1.15e-18!32;CL:0000037!1.15e-18!32;CL:0000566!1.15e-18!32;CL:0000837!1.15e-18!32;CL:0002076!3.00e-17!15;CL:0002563!6.65e-17!9;CL:0002251!6.65e-17!9;CL:0000066!1.07e-16!25;CL:0002031!3.79e-16!25;CL:0000838!3.83e-14!12;CL:0000738!5.87e-14!17;CL:0002087!5.87e-14!17;CL:0000075!7.12e-14!7;CL:0000542!6.91e-13!13;CL:0000051!6.91e-13!13;CL:0002320!7.53e-13!46;CL:0000134!7.53e-13!46;CL:0000219!9.41e-13!54;CL:0000239!9.85e-13!6;CL:0000677!9.85e-13!6;CL:0000212!9.85e-13!6;CL:0000584!9.85e-13!6;CL:0000084!2.66e-12!11;CL:0000827!2.66e-12!11;CL:0000791!2.80e-12!9;CL:0000789!2.80e-12!9;CL:0002420!2.80e-12!9;CL:0002419!2.80e-12!9;CL:0000790!2.80e-12!9;CL:0000223!3.46e-12!20;CL:0000893!1.26e-10!6;CL:0002489!1.26e-10!6;CL:0000898!1.26e-10!6;CL:0000809!1.26e-10!6;CL:0000810!1.26e-10!6;CL:0000895!1.26e-10!6;CL:0000808!1.26e-10!6;CL:0000894!1.26e-10!6;CL:0000806!1.26e-10!6;CL:0000807!1.26e-10!6;CL:0000805!1.26e-10!6;CL:0002425!1.26e-10!6;CL:0002436!1.26e-10!6;CL:0002427!1.26e-10!6;CL:0002428!1.26e-10!6;CL:0002429!1.26e-10!6;CL:0002433!1.26e-10!6;CL:0002431!1.26e-10!6;CL:0002432!1.26e-10!6;CL:0000624!1.72e-10!8;CL:0000034!4.30e-09!97;CL:0000049!8.32e-08!19;CL:0000068!6.14e-07!3;CL:0002202!6.14e-07!3;CL:0000069!6.14e-07!3;CL:0002632!6.14e-07!3;CL:0002368!6.14e-07!3;CL:0000307!6.14e-07!3;CL:0000377!6.14e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.94e-25,6;CL:0000677,1.94e-25,6;CL:0000584,1.94e-25,6;CL:0000075,9.47e-22,7;CL:0002076,1.88e-17,15;CL:0002563,8.00e-17,9;CL:0002251,8.00e-17,9;CL:0000223,7.89e-13,20;CL:0000066,1.09e-12,25;CL:0002031,4.88e-10,25;CL:0002476,3.56e-09,2;CL:0000738,7.06e-09,17;CL:0002087,7.06e-09,17;CL:0000988,1.31e-07,32;CL:0002032,1.31e-07,32;CL:0000037,1.31e-07,32;CL:0000837,1.31e-07,32;CL:0000068,9.45e-07,3;CL:0002202,9.45e-07,3;CL:0000069,9.45e-07,3;CL:0002632,9.45e-07,3;CL:0002368,9.45e-07,3;CL:0000307,9.45e-07,3;CL:0000377,9.45e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.56e-19!15;UBERON:0003350!6.65e-17!9;UBERON:0004808!6.65e-17!9;UBERON:0001277!6.65e-17!9;UBERON:0000485!3.14e-16!11;UBERON:0001242!3.47e-16!13;UBERON:0000060!3.47e-16!13;UBERON:0001262!3.47e-16!13;UBERON:0004786!3.47e-16!13;UBERON:0002384!7.53e-13!46;UBERON:0004923!5.34e-11!24;UBERON:0003126!6.14e-07!3;UBERON:0001005!6.14e-07!3;UBERON:0007196!6.14e-07!3;UBERON:0001558!6.14e-07!3 | |ontology_enrichment_uberon=UBERON:0000344!1.56e-19!15;UBERON:0003350!6.65e-17!9;UBERON:0004808!6.65e-17!9;UBERON:0001277!6.65e-17!9;UBERON:0000485!3.14e-16!11;UBERON:0001242!3.47e-16!13;UBERON:0000060!3.47e-16!13;UBERON:0001262!3.47e-16!13;UBERON:0004786!3.47e-16!13;UBERON:0002384!7.53e-13!46;UBERON:0004923!5.34e-11!24;UBERON:0003126!6.14e-07!3;UBERON:0001005!6.14e-07!3;UBERON:0007196!6.14e-07!3;UBERON:0001558!6.14e-07!3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,8.00e-17,9;UBERON:0004808,8.00e-17,9;UBERON:0001277,8.00e-17,9;UBERON:0000485,1.11e-13,11;UBERON:0000344,2.82e-13,15;UBERON:0001242,1.67e-11,13;UBERON:0001262,1.67e-11,13;UBERON:0004786,1.67e-11,13;UBERON:0004923,5.28e-08,24;UBERON:0003126,9.45e-07,3;UBERON:0001005,9.45e-07,3;UBERON:0007196,9.45e-07,3;UBERON:0001558,9.45e-07,3 | |||
|phase1_expression=0,1.04692622291808,2.27499619694768,3.0246421130683,2.50447864973174,1.00727563147134,2.56973904655078,0.774739940649458,4.08287294239834,4.68129052643987,0.34243593645101,0.159544317990673,0.342401459862411,0.0874204024189974,0.333109761815663,0,0,0.946386496074713,1.09691546884591,1.27316895539409,0,0,0.522399578277871,1.27993938234725,0.91763712426868,0.57423196411502,0.86152399231815,1.29282739611533,0.570070258369122,0,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85230430298152,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.453429360640713,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.865964164044856,2.02687892380079,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55390167361845,0.986852422704233,1.00730769818447,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.04692622291808,2.27499619694768,3.0246421130683,2.50447864973174,1.00727563147134,2.56973904655078,0.774739940649458,4.08287294239834,4.68129052643987,0.34243593645101,0.159544317990673,0.342401459862411,0.0874204024189974,0.333109761815663,0,0,0.946386496074713,1.09691546884591,1.27316895539409,0,0,0.522399578277871,1.27993938234725,0.91763712426868,0.57423196411502,0.86152399231815,1.29282739611533,0.570070258369122,0,0.221730510655305,0,0,0,0.288851619751275,0.664938581433969,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85230430298152,0,1.68046899571232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13589289999776,0.453429360640713,0,0.860423876981386,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.865964164044856,2.02687892380079,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0.599902730993408,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50791283939272,1.08781136763742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0.276399947608848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55390167361845,0.986852422704233,1.00730769818447,0,0,0,0,0,0,0,0,0.343706364687375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@Ube2d2 | |short_description=p8@Ube2d2 | ||
}} | }} |
Latest revision as of 05:00, 27 September 2015
Short description: | p8@Ube2d2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Ube2d2_5end |
Coexpression cluster: | MCL_coexpression_mm9:484 |
Association with transcript: | 8bp_to_ENSMUST00000167406_5end |
EntrezGene: | Ube2d2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.94e-25 | 6 |
gut absorptive cell | 1.94e-25 | 6 |
enterocyte | 1.94e-25 | 6 |
columnar/cuboidal epithelial cell | 9.47e-22 | 7 |
endo-epithelial cell | 1.88e-17 | 15 |
intestinal epithelial cell | 8.00e-17 | 9 |
epithelial cell of alimentary canal | 8.00e-17 | 9 |
endodermal cell | 7.89e-13 | 20 |
epithelial cell | 1.09e-12 | 25 |
hematopoietic lineage restricted progenitor cell | 4.88e-10 | 25 |
bone marrow macrophage | 3.56e-09 | 2 |
leukocyte | 7.06e-09 | 17 |
nongranular leukocyte | 7.06e-09 | 17 |
hematopoietic cell | 1.31e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.31e-07 | 32 |
hematopoietic stem cell | 1.31e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.31e-07 | 32 |
duct epithelial cell | 9.45e-07 | 3 |
epithelial cell of tracheobronchial tree | 9.45e-07 | 3 |
branched duct epithelial cell | 9.45e-07 | 3 |
epithelial cell of lower respiratory tract | 9.45e-07 | 3 |
respiratory epithelial cell | 9.45e-07 | 3 |
tracheal epithelial cell | 9.45e-07 | 3 |
tracheoblast | 9.45e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 8.00e-17 | 9 |
gastrointestinal system epithelium | 8.00e-17 | 9 |
intestinal epithelium | 8.00e-17 | 9 |
simple columnar epithelium | 1.11e-13 | 11 |
mucosa | 2.82e-13 | 15 |
intestinal mucosa | 1.67e-11 | 13 |
wall of intestine | 1.67e-11 | 13 |
gastrointestinal system mucosa | 1.67e-11 | 13 |
organ component layer | 5.28e-08 | 24 |
trachea | 9.45e-07 | 3 |
respiratory airway | 9.45e-07 | 3 |
tracheobronchial tree | 9.45e-07 | 3 |
lower respiratory tract | 9.45e-07 | 3 |