FFCP PHASE1:Hg19::chr2:89157095..89157160,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:89157095..89157160,-
|short_description=p2@AJ294735
|description=CAGE_peak_2_at_AJ294735_5end
|association_with_transcript=33bp_to_AJ294735_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_AJ294735_5end | |||
|cluster_id=chr2:89157095..89157160,- | |||
|coexpression_cluster_id=C668 | |||
|description=CAGE_peak_2_at_AJ294735_5end | |||
|id=chr2:89157095..89157160,- | |||
|ontology_enrichment_celltype=CL:0000236!9.57e-23!14;CL:0000945!1.92e-20!24;CL:0000826!1.92e-20!24;CL:0000838!9.53e-12!52;CL:0002087!2.05e-11!119;CL:0000542!2.09e-11!53;CL:0000051!2.09e-11!53;CL:0000738!6.17e-11!140;CL:0002031!2.15e-08!124;CL:0000037!5.54e-07!172;CL:0000566!5.54e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.79e-33;24!CL:0000236;4.60e-33;13!CL:0000542;1.11e-09;53!CL:0000784;1.09e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,6.92e-36,14;CL:0000945,1.95e-33,24;CL:0000826,1.95e-33,24;CL:0000838,5.62e-13,52;CL:0000542,1.19e-12,53;CL:0000051,1.19e-12,53;CL:0000784,1.22e-08,3;CL:0002087,9.41e-08,115;CL:0000785,2.66e-07,2;CL:0000955,2.66e-07,2;CL:0000818,2.66e-07,2;CL:0000954,2.66e-07,2;CL:0000816,2.66e-07,2;CL:0000738,3.93e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000051;1.11e-09;53!CL:0000954;2.70e-07;2!UBERON:0006965;4.52e-07;2!UBERON:0004872;6.10e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.64e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,3.82e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.42e-41!115;UBERON:0000178!1.36e-14!15;UBERON:0000179!1.36e-14!15;UBERON:0000463!1.36e-14!15;UBERON:0002193!9.65e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.91e-16;15!UBERON:0000179;1.91e-16;15!UBERON:0000463;1.91e-16;15!UBERON:0002390;1.80e-10;32!UBERON:0002193;1.19e-08;42!UBERON:0001829;1.45e-07;2!UBERON:0007023;5.91e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.86e-31,114;UBERON:0000178,2.16e-16,15;UBERON:0000179,2.16e-16,15;UBERON:0000463,2.16e-16,15;UBERON:0001829,1.43e-07,2 | |||
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| ||
|short_description=p2@AJ294735 | |||
}} | }} |
Latest revision as of 13:04, 29 July 2015
Short description: | p2@AJ294735 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_AJ294735_5end |
Coexpression cluster: | C668_lymphangiectasia_lymph_submaxillary_appendix_vein_CD19_lymphoma |
Association with transcript: | 33bp_to_AJ294735_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 6.92e-36 | 14 |
lymphocyte of B lineage | 1.95e-33 | 24 |
pro-B cell | 1.95e-33 | 24 |
lymphoid lineage restricted progenitor cell | 5.62e-13 | 52 |
lymphocyte | 1.19e-12 | 53 |
common lymphoid progenitor | 1.19e-12 | 53 |
plasmacytoid dendritic cell | 1.22e-08 | 3 |
nongranular leukocyte | 9.41e-08 | 115 |
mature B cell | 2.66e-07 | 2 |
pre-B-II cell | 2.66e-07 | 2 |
transitional stage B cell | 2.66e-07 | 2 |
small pre-B-II cell | 2.66e-07 | 2 |
immature B cell | 2.66e-07 | 2 |
leukocyte | 3.93e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
adult organism | 4.86e-31 | 114 |
blood | 2.16e-16 | 15 |
haemolymphatic fluid | 2.16e-16 | 15 |
organism substance | 2.16e-16 | 15 |
major salivary gland | 1.43e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 3.82e-07 | 10 |