FFCP PHASE1:Mm9::chr13:120197792..120197810,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=10 | |MCL_coexpression_id=10 | ||
|TSSclassifier=NA | |||
|UniProt=Q8C9V5,Q8BGK0,E9Q8F4,E9Q8F3,E9Q8F2 | |UniProt=Q8C9V5,Q8BGK0,E9Q8F4,E9Q8F3,E9Q8F2 | ||
|association_with_transcript=0bp_to_ENSMUST00000069902,ENSMUST00000099149,ENSMUST00000109204,ENSMUST00000109205,ENSMUST00000109206,ENSMUST00000133627,ENSMUST00000144599_5end | |association_with_transcript=0bp_to_ENSMUST00000069902,ENSMUST00000099149,ENSMUST00000109204,ENSMUST00000109205,ENSMUST00000109206,ENSMUST00000133627,ENSMUST00000144599_5end | ||
|cluster_id=chr13:120197792..120197810,- | |||
|description=CAGE_peak_1_at_ENSMUST00000069902_5end,CAGE_peak_1_at_ENSMUST00000099149_5end,CAGE_peak_1_at_ENSMUST00000109204_5end,CAGE_peak_1_at_ENSMUST00000109205_5end,CAGE_peak_1_at_ENSMUST00000109206_5end,CAGE_peak_1_at_ENSMUST00000133627_5end,CAGE_peak_1_at_ENSMUST00000144599_5end | |description=CAGE_peak_1_at_ENSMUST00000069902_5end,CAGE_peak_1_at_ENSMUST00000099149_5end,CAGE_peak_1_at_ENSMUST00000109204_5end,CAGE_peak_1_at_ENSMUST00000109205_5end,CAGE_peak_1_at_ENSMUST00000109206_5end,CAGE_peak_1_at_ENSMUST00000133627_5end,CAGE_peak_1_at_ENSMUST00000144599_5end | ||
|id=chr13:120197792..120197810,- | |id=chr13:120197792..120197810,- | ||
Latest revision as of 04:05, 27 September 2015
| Short description: | p1@ENSMUST00000069902, p1@ENSMUST00000099149, p1@ENSMUST00000109204, p1@ENSMUST00000109205, p1@ENSMUST00000109206, p1@ENSMUST00000133627, p1@ENSMUST00000144599 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_ENSMUST00000069902_5end, CAGE_peak_1_at_ENSMUST00000099149_5end, CAGE_peak_1_at_ENSMUST00000109204_5end, CAGE_peak_1_at_ENSMUST00000109205_5end, CAGE_peak_1_at_ENSMUST00000109206_5end, CAGE_peak_1_at_ENSMUST00000133627_5end, CAGE_peak_1_at_ENSMUST00000144599_5end |
| Coexpression cluster: | MCL_coexpression_mm9:10 |
| Association with transcript: | 0bp_to_ENSMUST00000069902, ENSMUST00000099149, ENSMUST00000109204, ENSMUST00000109205, ENSMUST00000109206, ENSMUST00000133627, ENSMUST00000144599_5end |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial tube | 4.07e-11 | 47 |
| unilaminar epithelium | 5.92e-11 | 66 |
| primary circulatory organ | 3.19e-10 | 18 |
| heart | 3.19e-10 | 18 |
| primitive heart tube | 3.19e-10 | 18 |
| primary heart field | 3.19e-10 | 18 |
| anterior lateral plate mesoderm | 3.19e-10 | 18 |
| heart tube | 3.19e-10 | 18 |
| heart primordium | 3.19e-10 | 18 |
| cardiac mesoderm | 3.19e-10 | 18 |
| cardiogenic plate | 3.19e-10 | 18 |
| heart rudiment | 3.19e-10 | 18 |
| cardiovascular system | 5.19e-10 | 23 |
| circulatory system | 5.19e-10 | 23 |
| gut epithelium | 2.80e-09 | 55 |
