FFCP PHASE1:Hg19::chr3:186330841..186330863,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr3:186330841..186330863,+
|short_description=p1@AHSG
|description=CAGE_peak_1_at_AHSG_5end
|association_with_transcript=0bp_to_ENST00000273784,NM_001622,uc003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=197 | |EntrezGene=197 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=349 | |HGNC=349 | ||
|TSSclassifier=strong | |||
|UniProt=C9JV77,P02765 | |UniProt=C9JV77,P02765 | ||
|association_with_transcript=0bp_to_ENST00000273784,NM_001622,uc003fqj.2,uc003fqk.3,uc003fql.3,uc003fqm.3,uc010hyp.2_5end | |||
|cluster_id=chr3:186330841..186330863,+ | |||
|coexpression_cluster_id=C129 | |||
|description=CAGE_peak_1_at_AHSG_5end | |||
|id=chr3:186330841..186330863,+ | |||
|ontology_enrichment_celltype=CL:0000181!7.16e-20!12;CL:0000417!7.16e-20!12;CL:0000668!7.16e-20!12;CL:0000414!7.16e-20!12;CL:0000412!7.16e-20!12;CL:0000182!7.16e-20!12;CL:0002322!1.97e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.19e-24;12!CL:0002322;4.79e-11;5!CL:0002563;5.52e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.19e-24,12;CL:0002322,4.47e-11,5;CL:0000223,8.96e-09,58;CL:0002563,5.52e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.81e-20;11!UBERON:0003104;1.07e-17;31!UBERON:0009497;9.53e-17;13!UBERON:0001041;3.86e-09;30!UBERON:0000358;5.84e-07;1!UBERON:0004140;6.97e-07;1 | |||
|ontology_enrichment_disease=DOID:114!1.43e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.45e-12;2!DOID:178;4.89e-07;1!DOID:326;4.89e-07;1!DOID:3978;4.89e-07;1!DOID:3394;4.89e-07;1!DOID:5844;4.89e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.54e-12,2;DOID:178,4.89e-07,1;DOID:326,4.89e-07,1;DOID:3978,4.89e-07,1;DOID:3394,4.89e-07,1;DOID:5844,4.89e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002107!8.52e-23!19;UBERON:0006925!8.52e-23!19;UBERON:0008836!8.52e-23!19;UBERON:0005057!1.65e-22!26;UBERON:0009854!7.95e-22!23;UBERON:0002368!6.96e-21!35;UBERON:0008835!2.38e-19!22;UBERON:0003894!2.38e-19!22;UBERON:0009856!5.49e-19!26;UBERON:0007499!9.83e-17!25;UBERON:0009497!9.83e-17!25;UBERON:0000015!9.83e-17!25;UBERON:0002423!9.83e-17!25;UBERON:0006235!9.83e-17!25;UBERON:0004161!9.83e-17!25;UBERON:0003929!1.87e-16!54;UBERON:0002365!1.71e-15!31;UBERON:0002330!1.71e-15!31;UBERON:0000949!1.94e-15!45;UBERON:0002530!1.95e-14!59;UBERON:0005172!2.97e-12!55;UBERON:0005173!2.97e-12!55;UBERON:0005911!4.03e-12!82;UBERON:0004921!8.17e-11!129;UBERON:0004185!8.17e-11!129;UBERON:0002417!1.05e-10!61;UBERON:0000916!1.05e-10!61;UBERON:0001007!7.37e-10!155;UBERON:0001555!7.37e-10!155;UBERON:0007026!7.37e-10!155;UBERON:0005177!3.05e-09!107;UBERON:0000077!1.03e-08!130;UBERON:0004119!1.49e-08!169;UBERON:0000925!1.49e-08!169;UBERON:0006595!1.49e-08!169;UBERON:0001041!3.35e-08!98;UBERON:0009569!1.67e-07!113;UBERON:0004907!2.15e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.83e-25;19!UBERON:0006925;5.83e-25;19!UBERON:0002423;1.33e-18;25!UBERON:0002368;6.28e-15;33!UBERON:0002365;2.76e-14;31!UBERON:0002330;2.76e-14;31!UBERON:0000922;4.31e-13;49!UBERON:0000949;1.79e-10;43!UBERON:0005172;7.80e-08;52!UBERON:0005173;7.80e-08;52!UBERON:0002530;3.55e-07;57!UBERON:0002146;4.08e-07;1!UBERON:0001301;4.08e-07;1!UBERON:0005623;4.08e-07;1!UBERON:0002417;4.17e-07;58!UBERON:0000916;4.17e-07;58!UBERON:0001007;4.45e-07;81!UBERON:0001242;5.52e-07;4!UBERON:0001262;5.52e-07;4!UBERON:0004786;5.52e-07;4!UBERON:0004808;5.52e-07;4!UBERON:0001277;5.52e-07;4!UBERON:0001052;6.79e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.83e-25,19;UBERON:0006925,5.83e-25,19;UBERON:0008836,5.83e-25,19;UBERON:0008835,2.38e-21,22;UBERON:0003894,2.38e-21,22;UBERON:0009854,2.35e-20,23;UBERON:0007499,1.33e-18,25;UBERON:0009497,1.33e-18,25;UBERON:0000015,1.33e-18,25;UBERON:0002423,1.33e-18,25;UBERON:0006235,1.33e-18,25;UBERON:0004161,1.33e-18,25;UBERON:0009856,7.89e-18,26;UBERON:0003929,1.67e-16,54;UBERON:0002368,9.25e-16,35;UBERON:0002365,1.05e-14,31;UBERON:0002330,1.05e-14,31;UBERON:0005172,6.16e-14,54;UBERON:0005173,6.16e-14,54;UBERON:0002417,2.63e-12,60;UBERON:0000916,2.63e-12,60;UBERON:0000949,7.46e-12,45;UBERON:0005911,1.27e-11,82;UBERON:0002530,1.71e-10,59;UBERON:0004921,1.18e-09,118;UBERON:0001041,1.05e-07,87;UBERON:0005177,1.52e-07,101;UBERON:0001007,2.86e-07,145;UBERON:0001555,2.86e-07,145;UBERON:0007026,2.86e-07,145;UBERON:0001301,3.85e-07,1;UBERON:0002146,4.34e-07,1;UBERON:0005623,4.34e-07,1;UBERON:0001242,5.52e-07,4;UBERON:0001262,5.52e-07,4;UBERON:0004786,5.52e-07,4;UBERON:0004808,5.52e-07,4;UBERON:0001277,5.52e-07,4;UBERON:0001052,6.79e-07,4 | |||
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| ||
|short_description=p1@AHSG | |||
}} | }} |
Latest revision as of 04:56, 17 September 2015
Short description: | p1@AHSG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AHSG_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | 0bp_to_ENST00000273784, NM_001622, uc003fqj.2, uc003fqk.3, uc003fql.3, uc003fqm.3, uc010hyp.2_5end |
EntrezGene: | AHSG |
HGNC: | 349 |
UniProt: | C9JV77P02765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.19e-24 | 12 |
embryonic stem cell | 4.47e-11 | 5 |
endodermal cell | 8.96e-09 | 58 |
intestinal epithelial cell | 5.52e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.54e-12 | 2 |
vascular disease | 4.89e-07 | 1 |
ischemia | 4.89e-07 | 1 |
extrinsic cardiomyopathy | 4.89e-07 | 1 |
myocardial ischemia | 4.89e-07 | 1 |
myocardial infarction | 4.89e-07 | 1 |