FFCP PHASE1:Hg19::chr3:186739710..186739719,+: Difference between revisions
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|id=chr3:186739710..186739719,+
|short_description=p14@ST6GAL1
|description=CAGE_peak_14_at_ST6GAL1_5end
|association_with_transcript=45bp_to_NM_003032,uc003frd.2_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6480 | |EntrezGene=6480 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10860 | |HGNC=10860 | ||
|TSSclassifier=strong | |||
|UniProt=P15907 | |UniProt=P15907 | ||
|association_with_transcript=45bp_to_NM_003032,uc003frd.2_5end | |||
|cluster_id=chr3:186739710..186739719,+ | |||
|coexpression_cluster_id=C995 | |||
|description=CAGE_peak_14_at_ST6GAL1_5end | |||
|id=chr3:186739710..186739719,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.10e-36!24;CL:0000826!2.10e-36!24;CL:0000236!1.34e-20!14;CL:0000542!1.86e-14!53;CL:0000051!1.86e-14!53;CL:0000838!2.91e-13!52 | |||
|ontology_enrichment_celltype_v019=CL:0000945;6.01e-73;24!CL:0000236;3.56e-29;13!CL:0000542;1.44e-20;53!CL:0000946;4.88e-08;1!CL:0000786;4.88e-08;1!CL:0000785;1.07e-07;1!CL:0000819;1.07e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.56e-73,24;CL:0000826,2.56e-73,24;CL:0000542,2.36e-35,53;CL:0000051,2.36e-35,53;CL:0000236,1.01e-34,14;CL:0000838,5.68e-32,52;CL:0002087,3.95e-14,115;CL:0000785,6.28e-14,2;CL:0000955,6.28e-14,2;CL:0000818,6.28e-14,2;CL:0000954,6.28e-14,2;CL:0000816,6.28e-14,2;CL:0002031,9.68e-12,120;CL:0000738,2.14e-11,136;CL:0000817,1.40e-09,3;CL:0002032,4.51e-09,161;CL:0000837,4.51e-09,161;CL:0000037,1.52e-08,168;CL:0000946,5.22e-08,1;CL:0000786,5.22e-08,1;CL:0000980,5.22e-08,1;CL:0000988,6.25e-08,177;CL:0000819,1.30e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;1.44e-20;53!CL:0000954;4.84e-14;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;1.67e-10;10!DOID:630;4.88e-08;1!DOID:0050177;4.88e-08;1!DOID:0050427;4.88e-08;1!DOID:12603;6.16e-08;1!DOID:0060073;1.07e-07;1!DOID:8675;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,1.65e-10,10;DOID:630,4.89e-08,1;DOID:0050177,4.89e-08,1;DOID:0050427,4.89e-08,1;DOID:12603,6.80e-08,1;DOID:0060073,1.30e-07,1;DOID:8675,1.30e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.00e-36!115;UBERON:0000178!2.40e-18!15;UBERON:0000179!2.40e-18!15;UBERON:0000463!2.40e-18!15;UBERON:0001049!7.77e-15!57;UBERON:0005068!7.77e-15!57;UBERON:0006241!7.77e-15!57;UBERON:0007135!7.77e-15!57;UBERON:0001893!1.66e-14!34;UBERON:0002020!2.36e-14!34;UBERON:0003528!2.36e-14!34;UBERON:0002791!2.16e-13!33;UBERON:0002616!7.38e-13!59;UBERON:0002780!1.18e-12!41;UBERON:0001890!1.18e-12!41;UBERON:0006240!1.18e-12!41;UBERON:0001869!2.99e-12!32;UBERON:0003080!3.08e-12!42;UBERON:0000955!6.44e-11!69;UBERON:0006238!6.44e-11!69;UBERON:0002308!1.51e-09!9;UBERON:0000125!1.51e-09!9;UBERON:0001017!4.53e-09!82;UBERON:0002619!5.12e-09!22;UBERON:0001950!1.63e-08!20;UBERON:0003075!1.68e-08!86;UBERON:0007284!1.68e-08!86;UBERON:0005743!2.31e-08!86;UBERON:0002346!7.55e-08!90;UBERON:0000956!1.12e-07!25;UBERON:0000203!1.12e-07!25;UBERON:0002420!2.38e-07!9;UBERON:0007245!2.38e-07!9;UBERON:0010009!2.38e-07!9;UBERON:0010011!2.38e-07!9;UBERON:0000454!2.38e-07!9;UBERON:0000073!5.25e-07!94;UBERON:0001016!5.25e-07!94;UBERON:0003056!5.33e-07!61;UBERON:0009663!7.52e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-19;15!UBERON:0000179;1.03e-19;15!UBERON:0000463;1.03e-19;15!UBERON:0001875;3.94e-13;2!UBERON:0006514;3.94e-13;2!UBERON:0002390;2.83e-10;32!UBERON:0002193;2.62e-08;42!UBERON:0000029;2.10e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.40e-19,15;UBERON:0000179,1.40e-19,15;UBERON:0000463,1.40e-19,15;UBERON:0001875,4.75e-13,2;UBERON:0006514,4.75e-13,2;UBERON:0000029,1.39e-07,1 | |||
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| ||
|short_description=p14@ST6GAL1 | |||
}} | }} |
Latest revision as of 06:04, 17 September 2015
Short description: | p14@ST6GAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_ST6GAL1_5end |
Coexpression cluster: | C995_B_plasma_lymphoma_xeroderma_acute_Burkitt_b |
Association with transcript: | 45bp_to_NM_003032, uc003frd.2_5end |
EntrezGene: | ST6GAL1 |
HGNC: | 10860 |
UniProt: | P15907 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.56e-73 | 24 |
pro-B cell | 2.56e-73 | 24 |
lymphocyte | 2.36e-35 | 53 |
common lymphoid progenitor | 2.36e-35 | 53 |
B cell | 1.01e-34 | 14 |
lymphoid lineage restricted progenitor cell | 5.68e-32 | 52 |
nongranular leukocyte | 3.95e-14 | 115 |
mature B cell | 6.28e-14 | 2 |
pre-B-II cell | 6.28e-14 | 2 |
transitional stage B cell | 6.28e-14 | 2 |
small pre-B-II cell | 6.28e-14 | 2 |
immature B cell | 6.28e-14 | 2 |
hematopoietic lineage restricted progenitor cell | 9.68e-12 | 120 |
leukocyte | 2.14e-11 | 136 |
precursor B cell | 1.40e-09 | 3 |
hematopoietic oligopotent progenitor cell | 4.51e-09 | 161 |
hematopoietic multipotent progenitor cell | 4.51e-09 | 161 |
hematopoietic stem cell | 1.52e-08 | 168 |
antibody secreting cell | 5.22e-08 | 1 |
plasma cell | 5.22e-08 | 1 |
plasmablast | 5.22e-08 | 1 |
hematopoietic cell | 6.25e-08 | 177 |
B-1 B cell | 1.30e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
blood | 1.40e-19 | 15 |
haemolymphatic fluid | 1.40e-19 | 15 |
organism substance | 1.40e-19 | 15 |
globus pallidus | 4.75e-13 | 2 |
pallidum | 4.75e-13 | 2 |
lymph node | 1.39e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 1.65e-10 | 10 |
genetic disease | 4.89e-08 | 1 |
monogenic disease | 4.89e-08 | 1 |
xeroderma pigmentosum | 4.89e-08 | 1 |
acute leukemia | 6.80e-08 | 1 |
lymphatic system cancer | 1.30e-07 | 1 |
lymphosarcoma | 1.30e-07 | 1 |