FFCP PHASE1:Hg19::chr3:45982430..45982440,+: Difference between revisions
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|id=chr3:45982430..45982440,+
|short_description=p6@CXCR6
|description=CAGE_peak_6_at_CXCR6_5end
|association_with_transcript=5bp_to_ENST00000438735_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10663 | |EntrezGene=10663 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16647 | |HGNC=16647 | ||
|TSSclassifier=strong | |||
|UniProt=O00574 | |UniProt=O00574 | ||
|association_with_transcript=5bp_to_ENST00000438735_5end | |||
|cluster_id=chr3:45982430..45982440,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_6_at_CXCR6_5end | |||
|id=chr3:45982430..45982440,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.19e-44!3;CL:0000039!6.30e-19!7;CL:0000586!6.30e-19!7;CL:0002537!2.25e-12!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;3.04e-85;3!CL:0000349;2.05e-24;19!CL:0000039;5.13e-17;7!CL:0000586;5.13e-17;7!CL:0000723;8.19e-08;61!CL:0000134;2.78e-07;55!CL:0002537;5.38e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,3.04e-85,3;CL:0000349,2.05e-24,19;CL:0000039,4.73e-17,7;CL:0000586,4.73e-17,7;CL:0002537,5.38e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0003124;3.16e-29;1 | |||
|ontology_enrichment_disease=DOID:1799!1.54e-15!1;DOID:10165!1.54e-15!1;DOID:1798!1.54e-15!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.19e-44!3;UBERON:0000920!5.19e-44!3;UBERON:0005631!1.39e-36!14;UBERON:0000158!1.39e-36!14;UBERON:0003124!3.07e-33!7;UBERON:0000478!1.16e-28!24;UBERON:0000305!4.21e-09!7;UBERON:0004923!8.09e-09!57;UBERON:0004871!4.50e-08!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;3.04e-85;3!UBERON:0000920;3.04e-85;3!UBERON:0005631;9.95e-46;10!UBERON:0000158;9.95e-46;10!UBERON:0000478;8.62e-30;24!UBERON:0001987;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,3.04e-85,3;UBERON:0003124,1.12e-64,7;UBERON:0005631,1.37e-50,14;UBERON:0000158,1.37e-50,14;UBERON:0000478,9.15e-30,24;UBERON:0004923,4.31e-11,66;UBERON:0001987,2.61e-08,4;UBERON:0004340,2.61e-08,4 | |||
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|short_description=p6@CXCR6 | |||
}} | }} |
Latest revision as of 09:37, 18 September 2015
Short description: | p6@CXCR6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_CXCR6_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 5bp_to_ENST00000438735_5end |
EntrezGene: | CXCR6 |
HGNC: | 16647 |
UniProt: | O00574 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 3.04e-85 | 3 |
extraembryonic cell | 2.05e-24 | 19 |
germ line cell | 4.73e-17 | 7 |
germ cell | 4.73e-17 | 7 |
amnion mesenchymal stem cell | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 3.04e-85 | 3 |
chorion | 1.12e-64 | 7 |
extraembryonic membrane | 1.37e-50 | 14 |
membranous layer | 1.37e-50 | 14 |
extraembryonic structure | 9.15e-30 | 24 |
organ component layer | 4.31e-11 | 66 |
placenta | 2.61e-08 | 4 |
allantois | 2.61e-08 | 4 |