FFCP PHASE1:Hg19::chr3:79552183..79552188,+: Difference between revisions
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|id=chr3:79552183..79552188,+
|short_description=p@chr3:79552183..79552188,+
|description=CAGE_peak_at_chr3:79552183..79552188,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:79552183..79552188,+ | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr3:79552183..79552188,+ | |||
|id=chr3:79552183..79552188,+ | |||
|ontology_enrichment_celltype=CL:0002150!4.00e-12!3;CL:0000861!4.00e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0000054;7.05e-18;2!CL:0000137;7.05e-18;2!CL:0000092;7.05e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,7.67e-18,2;CL:0000137,7.67e-18,2;CL:0000092,7.67e-18,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.97e-14;10!UBERON:0005564;3.97e-14;10 | |||
|ontology_enrichment_disease=DOID:6193!1.65e-10!1;DOID:0060085!1.98e-10!1;DOID:3165!1.98e-10!1;DOID:0060121!1.98e-10!1;DOID:2438!1.98e-10!1;DOID:4418!1.98e-10!1;DOID:9119!5.30e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:6193;1.84e-34;1!DOID:0060085;3.05e-34;1!DOID:3165;3.05e-34;1!DOID:0060121;3.05e-34;1!DOID:2438;3.05e-34;1!DOID:4418;3.05e-34;1!DOID:3350;5.48e-18;2!DOID:200;7.05e-18;2!DOID:4305;7.05e-18;2!DOID:0060072;1.27e-09;4!DOID:201;7.80e-07;6!DOID:0060100;7.80e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.84e-34,1;DOID:0060085,3.61e-34,1;DOID:3165,3.61e-34,1;DOID:0060121,3.61e-34,1;DOID:2438,3.61e-34,1;DOID:4418,3.61e-34,1;DOID:3350,5.48e-18,2;DOID:200,7.67e-18,2;DOID:4305,7.67e-18,2;DOID:0060072,1.32e-09,4;DOID:201,8.02e-07,6;DOID:0060100,8.02e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001282!3.40e-10!1;UBERON:0009842!3.40e-10!1;UBERON:0003704!3.40e-10!1;UBERON:0001171!3.40e-10!1;UBERON:0001172!3.40e-10!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;2.19e-17;8!UBERON:0003135;6.11e-13;11!UBERON:0000014;1.27e-09;4!UBERON:0000991;3.05e-07;21!UBERON:0003101;5.91e-07;22!UBERON:0000079;5.91e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.38e-17,8;UBERON:0003135,6.49e-13,11;UBERON:0000014,1.32e-09,4;UBERON:0000991,3.14e-07,21;UBERON:0009196,3.14e-07,21;UBERON:0009117,3.14e-07,21;UBERON:0005564,3.14e-07,21;UBERON:0004176,6.09e-07,22;UBERON:0003101,6.09e-07,22;UBERON:0000079,6.09e-07,22 | |||
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|short_description=p@chr3:79552183..79552188,+ | |||
}} | }} |
Latest revision as of 23:41, 29 July 2015
Short description: | p@chr3:79552183..79552188, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:79552183..79552188, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 7.67e-18 | 2 |
osteocyte | 7.67e-18 | 2 |
osteoclast | 7.67e-18 | 2 |
Ontology term | p-value | n |
---|---|---|
testis | 2.38e-17 | 8 |
male reproductive organ | 6.49e-13 | 11 |
zone of skin | 1.32e-09 | 4 |
gonad | 3.14e-07 | 21 |
indifferent external genitalia | 3.14e-07 | 21 |
indifferent gonad | 3.14e-07 | 21 |
gonad primordium | 3.14e-07 | 21 |
external genitalia | 6.09e-07 | 22 |
male organism | 6.09e-07 | 22 |
male reproductive system | 6.09e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.84e-34 | 1 |
organ system benign neoplasm | 3.61e-34 | 1 |
skin benign neoplasm | 3.61e-34 | 1 |
integumentary system benign neoplasm | 3.61e-34 | 1 |
dermis tumor | 3.61e-34 | 1 |
cutaneous fibrous histiocytoma | 3.61e-34 | 1 |
mesenchymal cell neoplasm | 5.48e-18 | 2 |
giant cell tumor | 7.67e-18 | 2 |
bone giant cell tumor | 7.67e-18 | 2 |
benign neoplasm | 1.32e-09 | 4 |
connective tissue cancer | 8.02e-07 | 6 |
musculoskeletal system cancer | 8.02e-07 | 6 |