FFCP PHASE1:Hg19::chr4:10736435..10736454,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:10736435..10736454,-
|short_description=p@chr4:10736435..10736454,-
|description=CAGE_peak_at_chr4:10736435..10736454,-
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr4:10736435..10736454,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_at_chr4:10736435..10736454,- | |||
|id=chr4:10736435..10736454,- | |||
|ontology_enrichment_celltype=CL:0000624!2.38e-08!6;CL:0000838!7.30e-08!52;CL:0000542!1.17e-07!53;CL:0000051!1.17e-07!53;CL:0000815!1.83e-07!2;CL:0000792!1.83e-07!2;CL:0002677!1.83e-07!2;CL:0000242!5.33e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000815;1.11e-20;2!CL:0000792;1.11e-20;2!CL:0002677;1.11e-20;2!CL:0000898;4.00e-14;3!CL:0000167;1.97e-11;1!CL:0000164;1.97e-11;1!CL:0000502;1.97e-11;1!CL:0000172;1.97e-11;1!CL:0000173;1.97e-11;1!CL:0000624;1.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,1.17e-20,2;CL:0000792,1.17e-20,2;CL:0002677,1.17e-20,2;CL:0000898,4.14e-14,3;CL:0000167,1.97e-11,1;CL:0000164,1.97e-11,1;CL:0000502,1.97e-11,1;CL:0000172,1.97e-11,1;CL:0000173,1.97e-11,1;CL:0002351,1.97e-11,1;CL:0000624,1.68e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002351;1.97e-11;1!UBERON:0006298;2.42e-11;1!UBERON:0001045;4.22e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.97e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.97e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0006947!6.43e-10!3;UBERON:0004054!6.43e-10!3;UBERON:0000007!1.01e-07!2;UBERON:0005904!1.59e-07!4;UBERON:0004177!7.86e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;1.70e-21;2!UBERON:0001000;2.42e-11;1!UBERON:0001736;2.42e-11;1!UBERON:0005352;2.42e-11;1!UBERON:0003296;3.12e-11;4!UBERON:0010133;3.12e-11;4!UBERON:0001154;4.22e-11;1!UBERON:0001153;4.22e-11;1!UBERON:0009854;4.22e-11;1!UBERON:0001894;8.86e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000007,1.70e-21,2;UBERON:0001000,2.18e-11,1;UBERON:0005352,2.18e-11,1;UBERON:0001736,2.42e-11,1;UBERON:0006298,2.42e-11,1;UBERON:0003296,3.12e-11,4;UBERON:0010133,3.12e-11,4;UBERON:0001154,3.63e-11,1;UBERON:0001153,3.63e-11,1;UBERON:0001045,3.63e-11,1;UBERON:0001894,8.86e-07,7;UBERON:0006222,8.86e-07,7 | |||
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| ||
|short_description=p@chr4:10736435..10736454,- | |||
}} | }} |
Latest revision as of 00:43, 30 July 2015
Short description: | p@chr4:10736435..10736454, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:10736435..10736454, - |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 1.17e-20 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 1.17e-20 | 2 |
naive regulatory T cell | 1.17e-20 | 2 |
naive T cell | 4.14e-14 | 3 |
peptide hormone secreting cell | 1.97e-11 | 1 |
enteroendocrine cell | 1.97e-11 | 1 |
type D enteroendocrine cell | 1.97e-11 | 1 |
somatostatin secreting cell | 1.97e-11 | 1 |
pancreatic D cell | 1.97e-11 | 1 |
progenitor cell of endocrine pancreas | 1.97e-11 | 1 |
CD4-positive, alpha-beta T cell | 1.68e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pituitary gland | 1.70e-21 | 2 |
vas deferens | 2.18e-11 | 1 |
spermatic cord | 2.18e-11 | 1 |
submandibular gland | 2.42e-11 | 1 |
submandibular gland primordium | 2.42e-11 | 1 |
gland of diencephalon | 3.12e-11 | 4 |
neuroendocrine gland | 3.12e-11 | 4 |
vermiform appendix | 3.63e-11 | 1 |
caecum | 3.63e-11 | 1 |
midgut | 3.63e-11 | 1 |
diencephalon | 8.86e-07 | 7 |
future diencephalon | 8.86e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.97e-11 | 1 |