FFCP PHASE1:Hg19::chr4:109090344..109090354,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:109090344..109090354,-
|short_description=p38@LEF1
|description=CAGE_peak_38_at_LEF1_5end
|association_with_transcript=-232bp_to_ENST00000379951,NM_0011307...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2,Q659G9 | |UniProt=Q9UJU2,Q659G9 | ||
|association_with_transcript=-232bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |||
|cluster_id=chr4:109090344..109090354,- | |||
|description=CAGE_peak_38_at_LEF1_5end | |||
|id=chr4:109090344..109090354,- | |||
|ontology_enrichment_celltype=CL:0000084!3.91e-11!25;CL:0000827!3.91e-11!25;CL:0000791!9.79e-08!18;CL:0000789!9.79e-08!18;CL:0002420!9.79e-08!18;CL:0002419!9.79e-08!18;CL:0000790!9.79e-08!18;CL:0002253!1.56e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000817;4.44e-18;1!CL:0002253;1.64e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.02e-09,2;CL:0000817,6.14e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!1.36e-08!4;UBERON:0005058!1.36e-08!4;UBERON:0009113!1.36e-08!4;UBERON:0003295!1.36e-08!4;UBERON:0005562!1.36e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;2.58e-34;2!UBERON:0005058;2.58e-34;2!UBERON:0009113;2.58e-34;2!UBERON:0004177;2.25e-14;5!UBERON:0005057;2.25e-14;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.03e-17,4;UBERON:0005058,1.03e-17,4;UBERON:0009113,1.03e-17,4;UBERON:0003295,1.03e-17,4;UBERON:0005562,1.03e-17,4;UBERON:0003351,3.85e-12,6;UBERON:0004177,1.53e-10,7;UBERON:0005057,1.53e-10,7;UBERON:0000974,1.20e-07,10;UBERON:0003408,1.20e-07,10;UBERON:0001042,1.20e-07,10;UBERON:0009145,1.20e-07,10;UBERON:0006562,5.00e-07,11;UBERON:0009722,5.00e-07,11;UBERON:0007690,5.00e-07,11 | |||
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| ||
|short_description=p38@LEF1 | |||
}} | }} |
Latest revision as of 15:14, 24 September 2015
Short description: | p38@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_38_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -232bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.02e-09 | 2 |
precursor B cell | 6.14e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.03e-17 | 4 |
hemolymphoid system gland | 1.03e-17 | 4 |
thymic region | 1.03e-17 | 4 |
pharyngeal gland | 1.03e-17 | 4 |
thymus primordium | 1.03e-17 | 4 |
pharyngeal epithelium | 3.85e-12 | 6 |
hemopoietic organ | 1.53e-10 | 7 |
immune organ | 1.53e-10 | 7 |
neck | 1.20e-07 | 10 |
gland of gut | 1.20e-07 | 10 |
chordate pharynx | 1.20e-07 | 10 |
pharyngeal region of foregut | 1.20e-07 | 10 |
pharynx | 5.00e-07 | 11 |
entire pharyngeal arch endoderm | 5.00e-07 | 11 |
early pharyngeal endoderm | 5.00e-07 | 11 |