FFCP PHASE1:Hg19::chr4:119948266..119948280,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:119948266..119948280,+
|short_description=p3@SYNPO2
|description=CAGE_peak_3_at_SYNPO2_5end
|association_with_transcript=0bp_to_FN422000_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=171024 | |EntrezGene=171024 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=17732 | |HGNC=17732 | ||
|TSSclassifier=strong | |||
|UniProt=C6H0M7 | |UniProt=C6H0M7 | ||
|association_with_transcript=0bp_to_FN422000_5end | |||
|cluster_id=chr4:119948266..119948280,+ | |||
|coexpression_cluster_id=C9 | |||
|description=CAGE_peak_3_at_SYNPO2_5end | |||
|id=chr4:119948266..119948280,+ | |||
|ontology_enrichment_celltype=CL:0000136!5.22e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;5.52e-10;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.12e-09,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.69e-29!115;UBERON:0000468!9.26e-10!659;UBERON:0000062!1.93e-09!511;UBERON:0000467!1.64e-08!625;UBERON:0000480!2.14e-08!626;UBERON:0000475!2.87e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;8.83e-09;16!UBERON:0002036;8.83e-09;16!UBERON:0003688;2.40e-08;6!UBERON:0002358;2.40e-08;6!UBERON:0003684;2.40e-08;6!UBERON:0001178;2.40e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.84e-20,114;UBERON:0003688,2.48e-08,6;UBERON:0002358,2.48e-08,6;UBERON:0003684,2.48e-08,6;UBERON:0001178,2.48e-08,6 | |||
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| ||
|short_description=p3@SYNPO2 | |||
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Latest revision as of 21:43, 24 September 2015
Short description: | p3@SYNPO2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SYNPO2_5end |
Coexpression cluster: | C9_skeletal_diaphragm_tongue_throat_penis_heart_left |
Association with transcript: | 0bp_to_FN422000_5end |
EntrezGene: | SYNPO2 |
HGNC: | 17732 |
UniProt: | C6H0M7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.12e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.84e-20 | 114 |
omentum | 2.48e-08 | 6 |
peritoneum | 2.48e-08 | 6 |
abdominal cavity | 2.48e-08 | 6 |
visceral peritoneum | 2.48e-08 | 6 |