FFCP PHASE1:Hg19::chr4:155506825..155506837,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:155506825..155506837,-
|short_description=p8@FGA
|description=CAGE_peak_8_at_FGA_5end
|association_with_transcript=-57bp_to_M26878_5end
|EntrezGene=2243
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2243 | |EntrezGene=2243 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3661 | |HGNC=3661 | ||
|TSSclassifier=strong | |||
|UniProt=P02671 | |UniProt=P02671 | ||
|association_with_transcript=-57bp_to_M26878_5end | |||
|cluster_id=chr4:155506825..155506837,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_8_at_FGA_5end | |||
|id=chr4:155506825..155506837,- | |||
|ontology_enrichment_celltype=CL:0000181!2.17e-41!12;CL:0000417!2.17e-41!12;CL:0000668!2.17e-41!12;CL:0000414!2.17e-41!12;CL:0000412!2.17e-41!12;CL:0000182!2.17e-41!12;CL:0000223!1.44e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.98e-11;11!UBERON:0009497;1.13e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!9.91e-51!19;UBERON:0006925!9.91e-51!19;UBERON:0008836!9.91e-51!19;UBERON:0005057!3.55e-48!26;UBERON:0008835!8.01e-44!22;UBERON:0003894!8.01e-44!22;UBERON:0009854!6.41e-42!23;UBERON:0007499!1.44e-38!25;UBERON:0009497!1.44e-38!25;UBERON:0000015!1.44e-38!25;UBERON:0002423!1.44e-38!25;UBERON:0006235!1.44e-38!25;UBERON:0004161!1.44e-38!25;UBERON:0009856!4.37e-37!26;UBERON:0002365!4.19e-31!31;UBERON:0002330!4.19e-31!31;UBERON:0002368!1.52e-27!35;UBERON:0005172!1.05e-22!55;UBERON:0005173!1.05e-22!55;UBERON:0000949!2.09e-21!45;UBERON:0002417!1.89e-20!61;UBERON:0000916!1.89e-20!61;UBERON:0003929!8.10e-18!54;UBERON:0002530!2.70e-16!59;UBERON:0001041!1.29e-12!98;UBERON:0005911!1.15e-11!82;UBERON:0005177!1.59e-11!107;UBERON:0009569!6.83e-11!113;UBERON:0002405!1.34e-10!115;UBERON:0000466!1.00e-09!126;UBERON:0000077!2.05e-09!130;UBERON:0004921!2.05e-09!129;UBERON:0004185!2.05e-09!129;UBERON:0003914!5.12e-08!118;UBERON:0002106!8.29e-08!3;UBERON:0004854!8.29e-08!3;UBERON:0009034!8.29e-08!3;UBERON:0002095!8.29e-08!3;UBERON:0004782!8.29e-08!3;UBERON:0003281!8.29e-08!3;UBERON:0009664!8.29e-08!3;UBERON:0002296!8.29e-08!3;UBERON:0005602!8.29e-08!3;UBERON:0001179!8.29e-08!3;UBERON:0006293!8.29e-08!3;UBERON:0001007!9.07e-08!155;UBERON:0001555!9.07e-08!155;UBERON:0007026!9.07e-08!155;UBERON:0001048!3.53e-07!168;UBERON:0004119!4.35e-07!169;UBERON:0000925!4.35e-07!169;UBERON:0006595!4.35e-07!169;UBERON:0000490!8.37e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.77e-37;19!UBERON:0006925;1.77e-37;19!UBERON:0002423;1.27e-28;25!UBERON:0002365;4.10e-23;31!UBERON:0002330;4.10e-23;31!UBERON:0002368;5.53e-20;33!UBERON:0000949;1.75e-14;43!UBERON:0005172;1.92e-10;52!UBERON:0005173;1.92e-10;52!UBERON:0002417;4.32e-08;58!UBERON:0000916;4.32e-08;58!UBERON:0002530;1.26e-07;57!UBERON:0001007;1.70e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.91e-37,19;UBERON:0006925,1.91e-37,19;UBERON:0008836,1.91e-37,19;UBERON:0008835,2.03e-32,22;UBERON:0003894,2.03e-32,22;UBERON:0009854,4.92e-31,23;UBERON:0007499,1.35e-28,25;UBERON:0009497,1.35e-28,25;UBERON:0000015,1.35e-28,25;UBERON:0002423,1.35e-28,25;UBERON:0006235,1.35e-28,25;UBERON:0004161,1.35e-28,25;UBERON:0009856,1.62e-27,26;UBERON:0002365,3.66e-23,31;UBERON:0002330,3.66e-23,31;UBERON:0002368,1.43e-20,35;UBERON:0000949,4.25e-16,45;UBERON:0003929,1.76e-13,54;UBERON:0005172,1.76e-13,54;UBERON:0005173,1.76e-13,54;UBERON:0002530,2.28e-12,59;UBERON:0002417,3.62e-12,60;UBERON:0000916,3.62e-12,60;UBERON:0005911,5.51e-09,82;UBERON:0001041,1.75e-08,87;UBERON:0005177,2.43e-07,101 | |||
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|short_description=p8@FGA | |||
}} | }} |
Latest revision as of 06:50, 16 September 2015
Short description: | p8@FGA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FGA_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -57bp_to_M26878_5end |
EntrezGene: | FGA |
HGNC: | 3661 |
UniProt: | P02671 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 1.91e-37 | 19 |
digestive gland | 1.91e-37 | 19 |
liver bud | 1.91e-37 | 19 |
hepatic diverticulum | 2.03e-32 | 22 |
liver primordium | 2.03e-32 | 22 |
digestive tract diverticulum | 4.92e-31 | 23 |
epithelial sac | 1.35e-28 | 25 |
epithelium of foregut-midgut junction | 1.35e-28 | 25 |
anatomical boundary | 1.35e-28 | 25 |
hepatobiliary system | 1.35e-28 | 25 |
foregut-midgut junction | 1.35e-28 | 25 |
septum transversum | 1.35e-28 | 25 |
sac | 1.62e-27 | 26 |
exocrine gland | 3.66e-23 | 31 |
exocrine system | 3.66e-23 | 31 |
endocrine gland | 1.43e-20 | 35 |
endocrine system | 4.25e-16 | 45 |
gut epithelium | 1.76e-13 | 54 |
abdomen element | 1.76e-13 | 54 |
abdominal segment element | 1.76e-13 | 54 |
gland | 2.28e-12 | 59 |
abdominal segment of trunk | 3.62e-12 | 60 |
abdomen | 3.62e-12 | 60 |
endo-epithelium | 5.51e-09 | 82 |
foregut | 1.75e-08 | 87 |
trunk region element | 2.43e-07 | 101 |