FFCP PHASE1:Hg19::chr4:186732241..186732263,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:186732241..186732263,-
|short_description=p37@SORBS2
|description=CAGE_peak_37_at_SORBS2_5end
|association_with_transcript=0bp_to_ENST00000421639,ENST00000...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8470 | |EntrezGene=8470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24098 | |HGNC=24098 | ||
|TSSclassifier=strong | |||
|UniProt=C9J9D3 | |UniProt=C9J9D3 | ||
|association_with_transcript=0bp_to_ENST00000421639,ENST00000464819_5end | |||
|cluster_id=chr4:186732241..186732263,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_37_at_SORBS2_5end | |||
|id=chr4:186732241..186732263,- | |||
|ontology_enrichment_celltype=CL:0000181!5.05e-10!12;CL:0000417!5.05e-10!12;CL:0000668!5.05e-10!12;CL:0000414!5.05e-10!12;CL:0000412!5.05e-10!12;CL:0000182!5.05e-10!12;CL:0000064!7.74e-08!3;CL:0005012!7.74e-08!3;CL:0000067!7.74e-08!3;CL:0002304!7.74e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.36e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.28e-11,12 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.07e-15;1!UBERON:0004161;3.25e-12;11!UBERON:0003104;2.25e-11;31!UBERON:0009497;2.00e-10;13!UBERON:0007297;2.40e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.41e-20!115;UBERON:0002368!6.33e-15!35;UBERON:0003056!4.04e-14!61;UBERON:0000481!1.30e-11!347;UBERON:0005057!1.38e-11!26;UBERON:0003075!1.56e-11!86;UBERON:0007284!1.56e-11!86;UBERON:0002346!9.72e-11!90;UBERON:0000949!1.13e-10!45;UBERON:0007625!5.41e-10!11;UBERON:0000153!6.34e-10!129;UBERON:0007811!6.34e-10!129;UBERON:0002107!7.17e-10!19;UBERON:0006925!7.17e-10!19;UBERON:0008836!7.17e-10!19;UBERON:0000488!8.17e-10!4;UBERON:0002530!1.62e-09!59;UBERON:0000483!2.10e-09!309;UBERON:0000119!3.42e-09!312;UBERON:0000477!5.96e-09!286;UBERON:0002780!6.14e-09!41;UBERON:0001890!6.14e-09!41;UBERON:0006240!6.14e-09!41;UBERON:0003080!1.19e-08!42;UBERON:0005743!2.36e-08!86;UBERON:0000970!2.69e-08!20;UBERON:0008835!2.92e-08!22;UBERON:0003894!2.92e-08!22;UBERON:0000033!2.93e-08!123;UBERON:0003929!3.66e-08!54;UBERON:0000062!7.06e-08!511;UBERON:0001778!7.74e-08!3;UBERON:0001775!7.74e-08!3;UBERON:0009854!8.08e-08!23;UBERON:0002104!8.09e-08!21;UBERON:0002200!2.73e-07!11;UBERON:0006876!2.73e-07!11;UBERON:0002771!2.74e-07!3;UBERON:0000955!3.35e-07!69;UBERON:0006238!3.35e-07!69;UBERON:0005911!3.75e-07!82;UBERON:0002616!3.94e-07!59;UBERON:0000073!4.38e-07!94;UBERON:0001016!4.38e-07!94;UBERON:0007499!4.82e-07!25;UBERON:0009497!4.82e-07!25;UBERON:0000015!4.82e-07!25;UBERON:0002423!4.82e-07!25;UBERON:0006235!4.82e-07!25;UBERON:0004161!4.82e-07!25;UBERON:0002791!5.28e-07!33;UBERON:0000020!5.46e-07!23;UBERON:0000019!5.48e-07!19;UBERON:0000047!5.48e-07!19;UBERON:0004088!5.48e-07!19;UBERON:0003072!5.48e-07!19;UBERON:0003071!5.48e-07!19;UBERON:0004128!5.48e-07!19;UBERON:0001871!5.68e-07!7;UBERON:0000475!7.32e-07!365;UBERON:0000956!9.00e-07!25;UBERON:0000203!9.00e-07!25;UBERON:0002020!9.79e-07!34;UBERON:0003528!9.79e-07!34;UBERON:0001893!9.79e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;8.94e-19;19!UBERON:0006925;8.94e-19;19!UBERON:0001301;2.21e-15;1!UBERON:0002423;2.78e-14;25!UBERON:0002368;4.82e-13;33!UBERON:0002365;1.66e-11;31!UBERON:0002330;1.66e-11;31!UBERON:0000949;4.80e-11;43!UBERON:0005172;4.91e-10;52!UBERON:0005173;4.91e-10;52!UBERON:0001905;2.40e-08;2!UBERON:0002757;2.40e-08;2!UBERON:0010134;2.40e-08;2!UBERON:0005408;2.40e-08;2!UBERON:0001899;2.40e-08;2!UBERON:0002417;2.08e-07;58!UBERON:0000916;2.08e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.85e-19,19;UBERON:0006925,7.85e-19,19;UBERON:0008836,7.85e-19,19;UBERON:0008835,2.84e-16,22;UBERON:0003894,2.84e-16,22;UBERON:0005172,3.74e-16,54;UBERON:0005173,3.74e-16,54;UBERON:0009854,1.44e-15,23;UBERON:0001301,2.06e-15,1;UBERON:0002417,1.80e-14,60;UBERON:0000916,1.80e-14,60;UBERON:0002368,2.21e-14,35;UBERON:0007499,2.52e-14,25;UBERON:0009497,2.52e-14,25;UBERON:0000015,2.52e-14,25;UBERON:0002423,2.52e-14,25;UBERON:0006235,2.52e-14,25;UBERON:0004161,2.52e-14,25;UBERON:0009856,8.95e-14,26;UBERON:0002365,1.49e-11,31;UBERON:0002330,1.49e-11,31;UBERON:0000949,3.95e-11,45;UBERON:0002530,2.03e-08,59;UBERON:0005177,2.65e-08,101;UBERON:0001905,3.08e-08,2;UBERON:0002757,3.08e-08,2;UBERON:0010134,3.08e-08,2;UBERON:0005408,3.08e-08,2;UBERON:0001899,3.08e-08,2;UBERON:0009569,2.07e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,4.72631925345123,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.503865495708552,1.22722419002586,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.798716001995964,0.429226048136571,0.446342914883745,2.28423806454869,0,0,0.630265458457789,0.659326867049332,1.21326378937533,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,1.18208560948797,1.73100140845494,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,3.66380584195206,1.32506888912221,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,0,0.682986574053893,0.266107110487916,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.175669571386252,1.0478326039817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0.982827216677626,4.72631925345123,0,0.491953754172454,0.171567810298526,0,0,0,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769350375349168,0.656029291399411,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0.503865495708552,1.22722419002586,0,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.353830258013357,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,0.798716001995964,0.429226048136571,0.446342914883745,2.28423806454869,0,0,0.630265458457789,0.659326867049332,1.21326378937533,0.0984274815147488,0.0846733320657845,0,0,0,0,0,0,0,0.0607495566580247,0,1.18208560948797,1.73100140845494,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,3.66380584195206,1.32506888912221,0,0,0,0,0.213574825135389,0.471612915298998,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0.0634158101939068,0,0,0.496211178389294,0,0,0.535701835878287,1.00885116665647,0,0.682986574053893,0.266107110487916,0,0,0,0,0,0,0.313972371402056,0.157115589916002,0.280272163313789,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0.196308467114945,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0.322944549180031,0.0620747142958579,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p37@SORBS2 | |||
}} | }} |
Latest revision as of 03:57, 17 September 2015
Short description: | p37@SORBS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_37_at_SORBS2_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000421639, ENST00000464819_5end |
EntrezGene: | SORBS2 |
HGNC: | 24098 |
UniProt: | C9J9D3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.28e-11 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 7.85e-19 | 19 |
digestive gland | 7.85e-19 | 19 |
liver bud | 7.85e-19 | 19 |
hepatic diverticulum | 2.84e-16 | 22 |
liver primordium | 2.84e-16 | 22 |
abdomen element | 3.74e-16 | 54 |
abdominal segment element | 3.74e-16 | 54 |
digestive tract diverticulum | 1.44e-15 | 23 |
epididymis | 2.06e-15 | 1 |
abdominal segment of trunk | 1.80e-14 | 60 |
abdomen | 1.80e-14 | 60 |
endocrine gland | 2.21e-14 | 35 |
epithelial sac | 2.52e-14 | 25 |
epithelium of foregut-midgut junction | 2.52e-14 | 25 |
anatomical boundary | 2.52e-14 | 25 |
hepatobiliary system | 2.52e-14 | 25 |
foregut-midgut junction | 2.52e-14 | 25 |
septum transversum | 2.52e-14 | 25 |
sac | 8.95e-14 | 26 |
exocrine gland | 1.49e-11 | 31 |
exocrine system | 1.49e-11 | 31 |
endocrine system | 3.95e-11 | 45 |
gland | 2.03e-08 | 59 |
trunk region element | 2.65e-08 | 101 |
pineal body | 3.08e-08 | 2 |
regional part of epithalamus | 3.08e-08 | 2 |
secretory circumventricular organ | 3.08e-08 | 2 |
circumventricular organ | 3.08e-08 | 2 |
epithalamus | 3.08e-08 | 2 |
subdivision of trunk | 2.07e-07 | 112 |