FFCP PHASE1:Hg19::chr4:187422180..187422200,-: Difference between revisions
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|id=chr4:187422180..187422200,-
|short_description=p1@LOC285441
|description=CAGE_peak_1_at_LOC285441_5end
|association_with_transcript=11bp_to_NR_033900,NR_033901_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=285441 | |EntrezGene=285441 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_NR_033900,NR_033901_5end | |||
|cluster_id=chr4:187422180..187422200,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_LOC285441_5end | |||
|id=chr4:187422180..187422200,- | |||
|ontology_enrichment_celltype=CL:0000054!1.45e-07!2;CL:0000137!1.45e-07!2;CL:0000092!1.45e-07!2 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease=DOID:0060085!7.55e-14!1;DOID:3165!7.55e-14!1;DOID:0060121!7.55e-14!1;DOID:2438!7.55e-14!1;DOID:4418!7.55e-14!1;DOID:3112!1.10e-13!1;DOID:200!1.45e-07!2;DOID:4305!1.45e-07!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001301!9.73e-14!1;UBERON:0001882!2.07e-13!1;UBERON:0005403!2.07e-13!1;UBERON:0003135!5.51e-11!11;UBERON:0000473!2.37e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0002346;1.29e-13;4!UBERON:0000923;1.29e-13;4!UBERON:0010316;1.29e-13;4!UBERON:0005291;1.29e-13;4!UBERON:0002050;3.60e-11;5!UBERON:0005423;3.60e-11;5!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p1@LOC285441 | |||
}} | }} |
Latest revision as of 05:00, 17 September 2015
Short description: | p1@LOC285441 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC285441_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 11bp_to_NR_033900, NR_033901_5end |
EntrezGene: | LOC285441 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |