FFCP PHASE1:Hg19::chr4:22694543..22694568,+: Difference between revisions
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|id=chr4:22694543..22694568,+
|short_description=p1@GBA3
|description=CAGE_peak_1_at_GBA3_5end
|association_with_transcript=0bp_to_ENST00000503442,NM_001128432,NM_0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57733 | |EntrezGene=57733 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19069 | |HGNC=19069 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H227,A8K9N1 | |UniProt=Q9H227,A8K9N1 | ||
|association_with_transcript=0bp_to_ENST00000503442,NM_001128432,NM_020973,uc003gqp.3,uc010iep.2_5end | |||
|cluster_id=chr4:22694543..22694568,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_1_at_GBA3_5end | |||
|id=chr4:22694543..22694568,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.48e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.38e-08,12 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.10e-10;1!UBERON:0001045;1.61e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.50e-12!35;UBERON:0007023!2.39e-12!115;UBERON:0001155!5.56e-12!9;UBERON:0000160!3.22e-11!27;UBERON:0000059!9.57e-10!11;UBERON:0001007!3.94e-08!155;UBERON:0001555!3.94e-08!155;UBERON:0007026!3.94e-08!155;UBERON:0004119!6.70e-08!169;UBERON:0000925!6.70e-08!169;UBERON:0006595!6.70e-08!169;UBERON:0004921!1.42e-07!129;UBERON:0004185!1.42e-07!129;UBERON:0003929!2.58e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.38e-25;17!UBERON:0005409;1.06e-19;22!UBERON:0002108;3.13e-18;4!UBERON:0001155;4.98e-17;9!UBERON:0000059;5.57e-14;11!UBERON:0004921;6.33e-12;33!UBERON:0001154;1.61e-10;1!UBERON:0001301;1.61e-10;1!UBERON:0001153;1.61e-10;1!UBERON:0009854;1.61e-10;1!UBERON:0002423;1.90e-09;25!UBERON:0001007;4.62e-09;81!UBERON:0002107;2.62e-08;19!UBERON:0006925;2.62e-08;19!UBERON:0005172;1.96e-07;52!UBERON:0005173;1.96e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.43e-25,17;UBERON:0005409,1.81e-22,25;UBERON:0002108,3.13e-18,4;UBERON:0001155,5.09e-17,9;UBERON:0000059,5.67e-14,11;UBERON:0005172,5.75e-13,54;UBERON:0005173,5.75e-13,54;UBERON:0002417,1.51e-11,60;UBERON:0000916,1.51e-11,60;UBERON:0001301,1.46e-10,1;UBERON:0001154,1.61e-10,1;UBERON:0001153,1.61e-10,1;UBERON:0001045,1.61e-10,1;UBERON:0009854,2.99e-10,23;UBERON:0004921,1.18e-09,118;UBERON:0009497,1.89e-09,25;UBERON:0000015,1.89e-09,25;UBERON:0002423,1.89e-09,25;UBERON:0006235,1.89e-09,25;UBERON:0004161,1.89e-09,25;UBERON:0009856,4.73e-09,26;UBERON:0001007,6.10e-09,145;UBERON:0001555,6.10e-09,145;UBERON:0007026,6.10e-09,145;UBERON:0002107,2.59e-08,19;UBERON:0006925,2.59e-08,19;UBERON:0008836,2.59e-08,19;UBERON:0004119,6.54e-08,160;UBERON:0000925,6.54e-08,160;UBERON:0006595,6.54e-08,160;UBERON:0008835,3.38e-07,22;UBERON:0003894,3.38e-07,22 | |||
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| ||
|short_description=p1@GBA3 | |||
}} | }} |
Latest revision as of 08:53, 17 September 2015
Short description: | p1@GBA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GBA3_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 0bp_to_ENST00000503442, NM_001128432, NM_020973, uc003gqp.3, uc010iep.2_5end |
EntrezGene: | GBA3 |
HGNC: | 19069 |
UniProt: | Q9H227A8K9N1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.38e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.43e-25 | 17 |
gastrointestinal system | 1.81e-22 | 25 |
small intestine | 3.13e-18 | 4 |
colon | 5.09e-17 | 9 |
large intestine | 5.67e-14 | 11 |
abdomen element | 5.75e-13 | 54 |
abdominal segment element | 5.75e-13 | 54 |
abdominal segment of trunk | 1.51e-11 | 60 |
abdomen | 1.51e-11 | 60 |
epididymis | 1.46e-10 | 1 |
vermiform appendix | 1.61e-10 | 1 |
caecum | 1.61e-10 | 1 |
midgut | 1.61e-10 | 1 |
digestive tract diverticulum | 2.99e-10 | 23 |
subdivision of digestive tract | 1.18e-09 | 118 |
epithelium of foregut-midgut junction | 1.89e-09 | 25 |
anatomical boundary | 1.89e-09 | 25 |
hepatobiliary system | 1.89e-09 | 25 |
foregut-midgut junction | 1.89e-09 | 25 |
septum transversum | 1.89e-09 | 25 |
sac | 4.73e-09 | 26 |
digestive system | 6.10e-09 | 145 |
digestive tract | 6.10e-09 | 145 |
primitive gut | 6.10e-09 | 145 |
liver | 2.59e-08 | 19 |
digestive gland | 2.59e-08 | 19 |
liver bud | 2.59e-08 | 19 |
endoderm-derived structure | 6.54e-08 | 160 |
endoderm | 6.54e-08 | 160 |
presumptive endoderm | 6.54e-08 | 160 |
hepatic diverticulum | 3.38e-07 | 22 |
liver primordium | 3.38e-07 | 22 |