FFCP PHASE1:Hg19::chr4:48082192..48082207,-: Difference between revisions
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|id=chr4:48082192..48082207,-
|short_description=p3@TXK
|description=CAGE_peak_3_at_TXK_5end
|association_with_transcript=0bp_to_ENST00000507351,ENST00000509681,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7294 | |EntrezGene=7294 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12434 | |HGNC=12434 | ||
|TSSclassifier=strong | |||
|UniProt=D6RA14,D6RBM7 | |UniProt=D6RA14,D6RBM7 | ||
|association_with_transcript=0bp_to_ENST00000507351,ENST00000509681,uc011bzj.1_5end | |||
|cluster_id=chr4:48082192..48082207,- | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_3_at_TXK_5end | |||
|id=chr4:48082192..48082207,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002594;1.38e-33;4!CL:0000359;5.08e-09;32!CL:0002595;7.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002594,1.63e-33,4;CL:0000359,5.51e-10,32;CL:0002595,6.55e-08,5;CL:0000192,1.31e-07,43;CL:0000514,1.31e-07,43 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.84e-34;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002046!1.05e-09!5;UBERON:0004117!1.05e-09!5;UBERON:0007689!1.05e-09!5;UBERON:0007123!1.05e-09!5;UBERON:0003091!1.05e-09!5;UBERON:0009722!1.66e-07!11;UBERON:0007690!1.66e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001310;1.38e-33;4!UBERON:0010260;1.41e-15;9!UBERON:0001987;1.12e-09;4!UBERON:0003834;7.01e-08;5!UBERON:0001533;7.01e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001310,1.63e-33,4;UBERON:0010260,1.52e-15,9;UBERON:0001987,1.12e-09,4;UBERON:0004340,1.12e-09,4;UBERON:0003834,6.55e-08,5;UBERON:0001533,6.55e-08,5;UBERON:0001637,8.93e-08,42;UBERON:0003509,8.93e-08,42;UBERON:0004572,8.93e-08,42;UBERON:0004872,6.74e-07,83 | |||
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|short_description=p3@TXK | |||
}} | }} |
Latest revision as of 22:23, 17 September 2015
Short description: | p3@TXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TXK_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 0bp_to_ENST00000507351, ENST00000509681, uc011bzj.1_5end |
EntrezGene: | TXK |
HGNC: | 12434 |
UniProt: | D6RA14D6RBM7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the umbilical artery | 1.63e-33 | 4 |
vascular associated smooth muscle cell | 5.51e-10 | 32 |
smooth muscle cell of the subclavian artery | 6.55e-08 | 5 |
smooth muscle cell | 1.31e-07 | 43 |
smooth muscle myoblast | 1.31e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
umbilical artery | 1.63e-33 | 4 |
umbilical blood vessel | 1.52e-15 | 9 |
placenta | 1.12e-09 | 4 |
allantois | 1.12e-09 | 4 |
thoracic segment blood vessel | 6.55e-08 | 5 |
subclavian artery | 6.55e-08 | 5 |
artery | 8.93e-08 | 42 |
arterial blood vessel | 8.93e-08 | 42 |
arterial system | 8.93e-08 | 42 |
splanchnic layer of lateral plate mesoderm | 6.74e-07 | 83 |