FFCP PHASE1:Hg19::chrX:110187607..110187635,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5063 | |EntrezGene=5063 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8592 | |HGNC=8592 | ||
|TSSclassifier=strong | |||
|UniProt=B2RCU6,O75914 | |UniProt=B2RCU6,O75914 | ||
|association_with_transcript=94bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | |association_with_transcript=94bp_to_ENST00000425146,ENST00000446737,NM_001128166,NM_001128167,uc010npt.1,uc010npu.1_5end | ||
|cluster_id=chrX:110187607..110187635,+ | |||
|coexpression_cluster_id=C1552 | |coexpression_cluster_id=C1552 | ||
|description=CAGE_peak_2_at_PAK3_5end | |description=CAGE_peak_2_at_PAK3_5end | ||
Latest revision as of 01:14, 19 September 2015
| Short description: | p2@PAK3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_PAK3_5end |
| Coexpression cluster: | C1552_parietal_pituitary_small_hippocampus_duodenum_temporal_occipital |
| Association with transcript: | 94bp_to_ENST00000425146, ENST00000446737, NM_001128166, NM_001128167, uc010npt.1, uc010npu.1_5end |
| EntrezGene: | PAK3 |
| HGNC: | 8592 |
| UniProt: | B2RCU6O75914 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@PAK3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neuronal stem cell | 1.60e-14 | 8 |
| neuron | 5.42e-11 | 6 |
| neuroblast | 5.42e-11 | 6 |
| electrically signaling cell | 5.42e-11 | 6 |
| embryonic stem cell | 5.23e-08 | 5 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.26e-83 | 81 |
| nervous system | 4.66e-81 | 89 |
| neural tube | 6.31e-79 | 56 |
| neural rod | 6.31e-79 | 56 |
| future spinal cord | 6.31e-79 | 56 |
| neural keel | 6.31e-79 | 56 |
| regional part of nervous system | 7.59e-74 | 53 |
| regional part of brain | 7.59e-74 | 53 |
| regional part of forebrain | 1.48e-67 | 41 |
| forebrain | 1.48e-67 | 41 |
Showing 1 to 10 of 75 entries
