FFCP PHASE1:Hg19::chr4:88928893..88928902,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:88928893..88928902,+
|short_description=p4@PKD2
|description=CAGE_peak_4_at_PKD2_5end
|association_with_transcript=-481bp_to_ENST00000506727_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5311 | |EntrezGene=5311 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9009 | |HGNC=9009 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-481bp_to_ENST00000506727_5end | |||
|cluster_id=chr4:88928893..88928902,+ | |||
|description=CAGE_peak_4_at_PKD2_5end | |||
|id=chr4:88928893..88928902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002579;2.57e-25;3!CL:0002615;4.03e-25;3!CL:0002334;4.11e-17;12!CL:0000136;1.71e-15;13!CL:0002581;1.32e-09;1!CL:0002616;1.32e-09;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002615,3.03e-25,3;CL:0002579,3.03e-25,3;CL:0002334,3.86e-17,12;CL:0000136,1.56e-13,15;CL:0002581,9.44e-10,1;CL:0002616,1.21e-09,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003688!6.77e-08!6;UBERON:0002358!6.77e-08!6;UBERON:0003684!6.77e-08!6;UBERON:0001178!6.77e-08!6;UBERON:0001049!1.56e-07!57;UBERON:0005068!1.56e-07!57;UBERON:0006241!1.56e-07!57;UBERON:0007135!1.56e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.28e-48;6!UBERON:0002358;1.28e-48;6!UBERON:0003684;1.28e-48;6!UBERON:0001178;1.28e-48;6!UBERON:0004457;2.61e-32;9!UBERON:0000042;2.61e-32;9!UBERON:0005406;1.75e-17;2!UBERON:0002021;2.32e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.14e-48,6;UBERON:0002358,1.14e-48,6;UBERON:0003684,1.14e-48,6;UBERON:0001178,1.14e-48,6;UBERON:0004457,3.65e-24,12;UBERON:0000042,3.65e-24,12;UBERON:0005406,1.16e-17,2;UBERON:0002323,6.71e-08,46;UBERON:0002021,1.95e-07,5;UBERON:0004458,2.29e-07,49 | |||
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| ||
|short_description=p4@PKD2 | |||
}} | }} |
Latest revision as of 06:54, 19 September 2015
Short description: | p4@PKD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PKD2_5end |
Coexpression cluster: | NA |
Association with transcript: | -481bp_to_ENST00000506727_5end |
EntrezGene: | PKD2 |
HGNC: | 9009 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of omentum tissue | 3.03e-25 | 3 |
omentum preadipocyte | 3.03e-25 | 3 |
preadipocyte | 3.86e-17 | 12 |
fat cell | 1.56e-13 | 15 |
perirenal preadipocyte | 9.44e-10 | 1 |
perirenal adipocyte cell | 1.21e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.14e-48 | 6 |
peritoneum | 1.14e-48 | 6 |
abdominal cavity | 1.14e-48 | 6 |
visceral peritoneum | 1.14e-48 | 6 |
cavity lining | 3.65e-24 | 12 |
serous membrane | 3.65e-24 | 12 |
perirenal fat | 1.16e-17 | 2 |
body cavity | 6.71e-08 | 46 |
occipital lobe | 1.95e-07 | 5 |
body cavity or lining | 2.29e-07 | 49 |