FFCP PHASE1:Hg19::chr7:150974494..150974527,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6604 | |EntrezGene=6604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11108 | |HGNC=11108 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=10bp_to_ENST00000392811_5end | |association_with_transcript=10bp_to_ENST00000392811_5end | ||
|cluster_id=chr7:150974494..150974527,- | |||
|coexpression_cluster_id=C11 | |coexpression_cluster_id=C11 | ||
|description=CAGE_peak_12_at_SMARCD3_5end | |description=CAGE_peak_12_at_SMARCD3_5end | ||
Latest revision as of 06:16, 17 September 2015
| Short description: | p12@SMARCD3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_12_at_SMARCD3_5end |
| Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
| Association with transcript: | 10bp_to_ENST00000392811_5end |
| EntrezGene: | SMARCD3 |
| HGNC: | 11108 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p12@SMARCD3 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| regional part of metencephalon | 2.94e-49 | 9 |
| metencephalon | 2.94e-49 | 9 |
| future metencephalon | 2.94e-49 | 9 |
| regional part of nervous system | 2.44e-43 | 53 |
| regional part of brain | 2.44e-43 | 53 |
| neural tube | 5.56e-41 | 56 |
| neural rod | 5.56e-41 | 56 |
| future spinal cord | 5.56e-41 | 56 |
| neural keel | 5.56e-41 | 56 |
| brain | 3.38e-38 | 68 |
Showing 1 to 10 of 59 entries
