FFCP PHASE1:Hg19::chr5:150829073..150829087,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:150829073..150829087,+
|short_description=p10@SLC36A1
|description=CAGE_peak_10_at_SLC36A1_5end
|association_with_transcript=-487bp_to_ENST00000519829_5end...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=206358 | |EntrezGene=206358 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18761 | |HGNC=18761 | ||
|TSSclassifier=strong | |||
|UniProt=E5RI40 | |UniProt=E5RI40 | ||
|association_with_transcript=-487bp_to_ENST00000519829_5end | |||
|cluster_id=chr5:150829073..150829087,+ | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_10_at_SLC36A1_5end | |||
|id=chr5:150829073..150829087,+ | |||
|ontology_enrichment_celltype=CL:0002274!9.07e-19!5;CL:0000457!9.07e-19!5;CL:0002191!9.07e-19!5;CL:0000097!9.07e-19!5;CL:0000831!9.07e-19!5;CL:0002028!9.07e-19!5;CL:0000764!6.25e-13!2;CL:0000765!6.25e-13!2;CL:0000050!6.25e-13!2;CL:0000038!6.25e-13!2;CL:0000558!6.25e-13!2;CL:0000547!6.25e-13!2;CL:0000549!6.25e-13!2;CL:0000550!6.25e-13!2;CL:0000552!6.25e-13!2;CL:0002322!8.57e-11!5;CL:0000163!1.75e-10!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.44e-32;5!CL:0000764;6.30e-21;2!CL:0000558;6.30e-21;2!CL:0000163;1.24e-18;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-32,5;CL:0002028,1.44e-32,5;CL:0000764,5.70e-21,2;CL:0000765,5.70e-21,2;CL:0000050,5.70e-21,2;CL:0000038,5.70e-21,2;CL:0000558,5.70e-21,2;CL:0000547,5.70e-21,2;CL:0000549,5.70e-21,2;CL:0000550,5.70e-21,2;CL:0000552,5.70e-21,2;CL:0000163,1.24e-18,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000200!5.64e-15!6;UBERON:0004177!6.30e-13!7;UBERON:0007023!7.24e-12!115;UBERON:0001950!6.83e-09!20;UBERON:0002771!2.16e-08!3;UBERON:0002106!2.42e-08!3;UBERON:0004854!2.42e-08!3;UBERON:0009034!2.42e-08!3;UBERON:0002095!2.42e-08!3;UBERON:0004782!2.42e-08!3;UBERON:0003281!2.42e-08!3;UBERON:0009664!2.42e-08!3;UBERON:0002296!2.42e-08!3;UBERON:0005602!2.42e-08!3;UBERON:0001179!2.42e-08!3;UBERON:0006293!2.42e-08!3;UBERON:0002619!4.53e-08!22;UBERON:0001049!9.57e-08!57;UBERON:0005068!9.57e-08!57;UBERON:0006241!9.57e-08!57;UBERON:0007135!9.57e-08!57;UBERON:0002616!1.98e-07!59;UBERON:0001869!2.75e-07!32;UBERON:0002780!3.36e-07!41;UBERON:0001890!3.36e-07!41;UBERON:0006240!3.36e-07!41;UBERON:0001000!3.78e-07!1;UBERON:0005352!3.78e-07!1;UBERON:0000956!4.48e-07!25;UBERON:0000203!4.48e-07!25;UBERON:0003080!5.26e-07!42;UBERON:0002581!7.57e-07!1;UBERON:0001893!8.03e-07!34;UBERON:0007190!8.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.58e-10;17!UBERON:0002108;3.35e-09;4!UBERON:0005409;6.40e-08;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.76e-10,17;UBERON:0002108,3.49e-09,4;UBERON:0005409,4.15e-07,25 | |||
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|short_description=p10@SLC36A1 | |||
}} | }} |
Latest revision as of 09:08, 16 September 2015
Short description: | p10@SLC36A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC36A1_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | -487bp_to_ENST00000519829_5end |
EntrezGene: | SLC36A1 |
HGNC: | 18761 |
UniProt: | E5RI40 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.44e-32 | 5 |
basophil mast progenitor cell | 1.44e-32 | 5 |
erythroid lineage cell | 5.70e-21 | 2 |
erythroblast | 5.70e-21 | 2 |
megakaryocyte-erythroid progenitor cell | 5.70e-21 | 2 |
erythroid progenitor cell | 5.70e-21 | 2 |
reticulocyte | 5.70e-21 | 2 |
proerythroblast | 5.70e-21 | 2 |
basophilic erythroblast | 5.70e-21 | 2 |
polychromatophilic erythroblast | 5.70e-21 | 2 |
orthochromatic erythroblast | 5.70e-21 | 2 |
endocrine cell | 1.24e-18 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.76e-10 | 17 |
small intestine | 3.49e-09 | 4 |
gastrointestinal system | 4.15e-07 | 25 |