FFCP PHASE1:Hg19::chr8:144241664..144241748,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| (4 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4062 | |EntrezGene=4062 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6728 | |HGNC=6728 | ||
|TSSclassifier=strong | |||
|UniProt=O94772 | |UniProt=O94772 | ||
|association_with_transcript=0bp_to_ENST00000342752,ENST00000479685_5end | |association_with_transcript=0bp_to_ENST00000342752,ENST00000479685_5end | ||
|cluster_id=chr8:144241664..144241748,- | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_1_at_LY6H_5end | |description=CAGE_peak_1_at_LY6H_5end | ||
Latest revision as of 21:55, 16 September 2015
| Short description: | p1@LY6H |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_LY6H_5end |
| Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
| Association with transcript: | 0bp_to_ENST00000342752, ENST00000479685_5end |
| EntrezGene: | LY6H |
| HGNC: | 6728 |
| UniProt: | O94772 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@LY6H |
|---|
0
50
100
150
200
250
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 1.30e-89 | 56 |
| neural rod | 1.30e-89 | 56 |
| future spinal cord | 1.30e-89 | 56 |
| neural keel | 1.30e-89 | 56 |
| central nervous system | 1.97e-86 | 81 |
| regional part of nervous system | 7.13e-84 | 53 |
| regional part of brain | 7.13e-84 | 53 |
| nervous system | 3.91e-79 | 89 |
| regional part of forebrain | 3.48e-73 | 41 |
| forebrain | 3.48e-73 | 41 |
Showing 1 to 10 of 88 entries
