FFCP PHASE1:Hg19::chr10:43633914..43633935,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55454 | |EntrezGene=55454 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24292 | |HGNC=24292 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N6G5 | |UniProt=Q8N6G5 | ||
|association_with_transcript=0bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | |association_with_transcript=0bp_to_ENST00000374464,ENST00000374466,NM_018590,uc001jam.1,uc001jan.2_5end | ||
|cluster_id=chr10:43633914..43633935,+ | |||
|coexpression_cluster_id=C723 | |coexpression_cluster_id=C723 | ||
|description=CAGE_peak_2_at_CSGALNACT2_5end | |description=CAGE_peak_2_at_CSGALNACT2_5end | ||
Latest revision as of 05:39, 18 September 2015
| Short description: | p2@CSGALNACT2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_CSGALNACT2_5end |
| Coexpression cluster: | C723_CD14_CD4_Eosinophils_CD8_Natural_Neutrophils_CD19 |
| Association with transcript: | 0bp_to_ENST00000374464, ENST00000374466, NM_018590, uc001jam.1, uc001jan.2_5end |
| EntrezGene: | CSGALNACT2 |
| HGNC: | 24292 |
| UniProt: | Q8N6G5 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@CSGALNACT2 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| leukocyte | 8.89e-39 | 136 |
| myeloid leukocyte | 1.47e-33 | 72 |
| hematopoietic lineage restricted progenitor cell | 1.34e-30 | 120 |
| granulocyte monocyte progenitor cell | 1.09e-29 | 67 |
| nongranular leukocyte | 2.05e-29 | 115 |
| hematopoietic stem cell | 2.06e-28 | 168 |
| defensive cell | 7.93e-28 | 48 |
| phagocyte | 7.93e-28 | 48 |
| myeloid lineage restricted progenitor cell | 3.94e-27 | 66 |
| macrophage dendritic cell progenitor | 7.86e-27 | 61 |
Showing 1 to 10 of 37 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 5.81e-34 | 98 |
| blood island | 5.81e-34 | 98 |
| hemolymphoid system | 5.49e-30 | 108 |
| bone marrow | 2.81e-28 | 76 |
| bone element | 2.57e-27 | 82 |
| skeletal element | 4.88e-26 | 90 |
| immune system | 5.10e-25 | 93 |
| skeletal system | 1.10e-23 | 100 |
| connective tissue | 3.64e-20 | 371 |
| musculoskeletal system | 2.74e-17 | 167 |
Showing 1 to 10 of 14 entries
