Personal tools

MCL coexpression mm9:1390: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 1: Line 1:
{{MCL_coexpression_mm9
{{MCL_coexpression_mm9|coexpression_dpi_cluster_scores_mean=0.17146588050298,1.27486546493968,1.23789365417421,1.07571339020977,1.09061919772217,1.02851025086154,1.04186150690272,-0.566718784505596,-0.284531113090527,-0.27524788111396,-0.584165887619185,-0.54358098402234,-0.577043171886952,-0.56485965708975,-0.436525262945286,-0.438672508166584,-0.299692621000263,-0.507682837811549,-0.474791425582057,-0.47427858449478,0.352983209549862,-0.600193020932937,-0.607045129782077,1.28824031794331,1.31765632614443,1.32331902117652,1.30039297611993,1.2584739001145,1.30853205966777,1.19954791378744,1.45265719480794,-0.361684066406082,-0.458681576895309,-0.607045129782077,0.505891509785219,0.638088933765961,0.434044082138678,-0.329596143158344,-0.285849783146964,-0.33002858375844,-0.226130163056353,-0.292760245084966,-0.233510176594182,-0.386498470774165,-0.360123143304201,-0.390192699050857,-0.0538207734469207,0.20802754429253,0.208300878624438,0.152230389805,0.0428026602759303,0.219182801220815,-0.425103688977309,-0.523396411163004,-0.508159777100437,-0.0532521525335567,-0.179927645360034,-0.0550971542089024,0.138501299725031,0.136430512940553,0.0529957751369318,0.0156180943765297,-0.100795370014282,-0.363852431496677,-0.307582747788589,-0.351573401240126,0.0783586611809332,0.238876963229443,0.0585874140520945,0.0248834406965003,0.0152793702544922,-0.0103440961295559,-0.0465003190945559,0.00982909065128815,-0.0723419978871745,-0.089512390736126,-0.00915122849542001,0.00500548384665834,-0.0360022923050707,0.0892134339491426,-0.00743955408154305,0.0392678157658185,0.112852993541988,0.0113701651368858,0.0560483698739378,-0.056181220729165,-0.0656782593625928,0.0809678591486858,-0.157983792373116,-0.131807981268049,0.249870137810301,-0.106664792252294,0.075102812409758,0.0748200967833587,-0.0609491173970475,-0.102127536675194,0.522906316473753,-0.585814522410162,-0.522325318308431,-0.607045129782077,0.231902562669383,-0.607045129782077,-0.607045129782077,-0.607045129782077,0.659338068540806,0.665838129505616,0.679525182597152,0.699431383267714,-0.538923617570759,-0.180243571229893,-0.197682602997864,-0.180090708048747,-0.131092505892011,-0.162577183384952,-0.156804890784014,-0.347080644999937,0.229210125709255,-0.385311269995802,-0.088199205628733,0.147298964899036,0.100295297738733,0.0238299443125651,1.27294993304917,0.282480174214287,0.361988960750677,1.19756078697125,-0.553720781208189,-0.498510738459009,-0.56090706133271,-0.0797497940948454,0.0431993626497008,-0.0134185852397999,0.0164920666051027,0.0133287668252179,-0.0241295948579756,-0.0388832808182493,-0.0243878162328297,0.213098429470027,0.539941599656858,0.272043823877563,-0.222771729898027,-0.0987002550612853,-0.122680291170103,-0.0989232546290844,-0.18195517474281,-0.161201545375812,-0.13745431688428,-0.00327171800799316,-0.127739456909881,-0.125230311181856,-0.087362050622654,-0.113242106551495,-0.177775048313065,0.126168709070659,-0.191034565094898,-0.172873017968957,-0.607045129782077,-0.546936654692014,-0.510478685022152,-0.186381365636397,-0.132850550575014,-0.145023468334501,-0.0976703465567709,-0.104298826332903,-0.143081266820494,-0.129405101114406,-0.121399543875862,-0.0939026245597624,-0.106879350026764,-0.103734901774771,-0.0939402103085863,-0.0604995850795495,-0.0666584607211337,-0.0530355447184708,0.0514965957907141,-0.0702185564370992,1.54512647333377,1.17607528201856,-0.15097284445336,-0.0461601192622903,0.0838000948186645,0.219905350404967,0.366858180121299,0.53565994384085,1.07952445581387,0.52529775982888,0.582380332295236,0.658366942315988,0.665373416323861,1.01144694399047,1.0981732008926,1.06384233123681,-0.0215701039676327,-0.0109654960381358,0.0988753396210443,0.0772008468213536,0.161724401121526,0.160823205397813,0.284458384724372,0.288276741376389,0.31188381972984,0.330883889263794,-0.0297679061157028,-0.452857735000687,-0.464797515870434,-0.470166395608946,-0.398318573485901,-0.384292725743084,-0.249016927873537,-0.188502817425558,-0.281598077461287,-0.193752566519711,-0.235902512357397,-0.129965672929075,-0.146460771305312,-0.229965320750589,-0.136990911740155,-0.193331325376376,0.25780048853836,-0.0667505088834572,-0.120200704746074,-0.112108327205795,-0.0594631162929547,-0.00215645015456697,0.0535089085078736,0.155816369549337,-0.0132210382653707,0.066029771309863,0.0793527564758039,0.182036100914809,0.218090948684428,0.218974794572381,-0.473940983500123,-0.522326459126651,0.00558326499020141,-0.154845349666601,0.0364003947467202,-0.0184975469284857,-0.546396786787261,0.392175421748419,-0.180164305494152,-0.107156421472534,-0.193776114108586,-0.314837590390371,-0.305976641375574,-0.345120776401584,-0.159736986583757,-0.194453537234455,-0.265089180292899,0.00313143816157249,0.0893563287869995,-0.0440897974309412,-0.0839187523775285,0.159234057180088,0.217933518004034,0.0476259149159275,0.0764939958471036,0.0243308391460525,0.0834439993019916,0.11341163094522,0.300990454913587,0.0556823789697354,0.0454837729928215,0.0288627915299766,0.120697645454343,0.177019355278742,0.307459438364383,0.0375961780533485,0.191838661332041,0.211711047607826,0.210690170319964,0.175476130266974,0.169574451013547,0.16760213579999,0.288688555564537,0.367048202514611,0.84464813063563,0.322261316226075,0.0184707085061062,-0.00893214236587649,0.161385023425211,0.178405136291638,0.865952191779299,-0.00650175386128,-0.419807295648915,-0.266851555368636,-0.424500821646134,-0.540520918752834,-0.510001314178647,-0.527038034556386,-0.416753922617509,-0.419170574644898,-0.360312101548369,1.65898609452968,-0.0893869176346565,0.134981414094154,0.386088474828466,0.673939551768185,0.843222905591973,0.917478817044802,0.960202554269244,1.33931003079188,1.18118083837117,0.518297672248729,0.0660085891201403,-0.366329107007975,-0.213193679374035,-0.0585856448021038,-0.0774900001549267,-0.11612093805799,-0.0896849302166814,-0.1392881367706,-0.23704233646357,-0.181710941254455,0.0616806064822333,-0.4092591350263,-0.246416034998257,-0.303868972957152,-0.441526349277549,-0.349864409044971,-0.358125620240978,-0.422022941815561,-0.440888062163718,-0.455392463716149,-0.465780185298303,-0.474626559631428,-0.399874221802137,-0.414949212080388,-0.433317619969202,0.243704304771416,0.1488614997664,0.0203552712408404,0.251003288036094,0.459684156786954,0.359370260243409,0.753121356280708,0.424346372841259,1.00494168035233,-0.0296177266486887,-0.0371959440110532,-0.0289091517619785,0.0754854687491767,-0.0128015672494945,-0.0591115307189728,-0.0187052727945502,0.0669647771274844,0.0722954454224709,0.0594237865178101,-0.221399125628954,0.00977385517175433,-0.0379177448102987,-0.0473264659895586,-0.0801244132975176,0.0437043259890195,0.199114443457834,0.130236469004871,0.0795151254481926,0.199099946458759,0.130575351494669,0.0907805916821573,0.153666662467392,0.138543629273241,0.137177054700506,0.167209195079532,0.10386743345885,0.152392082489448,0.18897640849151,0.1449893104359,0.152165080627697,0.112404887501007,0.0906720501371186,0.103825210037142,0.114563270833112,0.121413864615084,0.157219239738836,0.0395596375709603,0.0965186535846183,0.104576607762393,0.149126061321275,0.125581339297411,0.119233242831339,0.157075302585066,0.123746714309551,0.094189069269513,0.188306640592984,0.150767760099825,0.124837761202696,0.166668390066642,0.152425035421624|coexpression_dpi_cluster_scores_median=0.0890885102666595,1.25524906125364,1.28761508400137,1.05557139111423,1.04584119122132,1.04100204435881,1.0156035901304,-0.566468902430624,-0.137337634919606,-0.139869174400861,-0.6032461841587,-0.564677798084736,-0.60680357288119,-0.602575536339325,-0.352937014750106,-0.37734005928894,-0.267188064404155,-0.53134814153484,-0.46302055648172,-0.432145274862937,0.34092210419056,-0.60680357288119,-0.60680357288119,1.20743223758257,1.27945002398446,1.35376108996615,1.3190003382654,1.24790794201364,1.29244961082225,1.20146879782168,1.43855810325058,-0.088431868366195,-0.161712914220887,-0.60680357288119,0.493826279276093,0.737675067508353,0.470707224984425,-0.24044095084723,-0.1465496010711,-0.280057113282192,-0.088431868366195,-0.191789295675993,-0.0937269569013565,-0.25496628139106,-0.245768840378416,-0.124311956084907,-0.076302559375353,0,0,0,0,0,-0.180270460803713,-0.386618891545818,-0.52592254831276,0,-0.088431868366195,-0.0223358046408003,0.051276580335957,0.124118137115786,0.0181717512740323,0,0,-0.244094241980889,-0.153848962471015,-0.131901481495964,0,0,0,0,0,0,0,0,0,-0.0671450951364075,0,0,0,0,0,0,0,0,0,-0.00602649653030395,-0.00511188783094195,0.0310671898239947,-0.088431868366195,-0.0310786423886855,0.229711836975522,-0.0147204050047444,0,0.0052866366438181,-0.0470398000691511,-0.0680291517459733,0.472340400113766,-0.60680357288119,-0.549619461030207,-0.60680357288119,0.229322281896598,-0.60680357288119,-0.60680357288119,-0.60680357288119,0.796445686450809,0.797431532799352,0.763308258783037,0.643699917900166,-0.587562896191352,-0.058377308660695,-0.0179110380821061,-0.088431868366195,-0.0547994183661987,-0.057946539389305,-0.048744404311079,-0.272485424492016,0.120570662761607,-0.216863857456756,0,0.0892948862730207,0.00969086577641165,0,1.26525147496596,0.362893675971137,0.526983017250698,1.16933294779128,-0.540122692353943,-0.530074121691611,-0.58839195896238,0,0,0.0202625513203502,-0.0236435296228335,0.00126228212861565,0,0,0,0.18427992066198,0.663017968396405,0.305153543316664,0,0,0,0.0597571272710892,-0.000350995837235191,-0.0762030834655285,-0.0561690917053955,0,0,0,0,0,0.096017983637161,0.353575036173736,0.126811471058335,0,-0.60680357288119,-0.547402334767943,-0.539846737946774,-0.133818923198304,-0.0679207429396455,-0.0428657874415998,-0.0590741678325672,0,-0.0572787073578265,-0.0430324239393145,-0.0246329769398294,0,0,0,0,0,0,0,0.00417076205365596,0,1.5708373795838,1.16640608932309,0,-0.0634831869297695,0.0263214775189998,0.191322065210199,0.301843442667787,0.530895546852736,1.10548956206539,0.477221752606278,0.60487876596747,0.642004406183116,0.642610919306993,1.08417465057968,1.13259159173745,1.10298786633095,0,0,0.126131055930957,0.0174500263436732,0.057600656555373,0.120148129138903,0.251102364611865,0.210615144836002,0.253174411020555,0.247574526204721,0.0039159305919197,-0.407694122159059,-0.280715174521557,-0.482117274290115,-0.433904984127944,-0.386994700703943,-0.139486486053465,-0.133131384712897,-0.21504694544904,-0.137061936310535,-0.274893251390313,-0.0197325059568339,-0.118541542731853,-0.140126593308502,-0.0878490797539099,-0.155634791441119,0.233039271316756,0,-0.0648742979348074,-0.139608910450384,-0.0730743777193618,0,0.0203123840622444,0.134647175908174,-0.0053964903424788,0.0621187734420416,0.0720256629102474,0.0991889283755564,0.16203489628373,0.134715576150255,-0.407147353458259,-0.512493189858079,-0.00158176745981027,-0.03551729583339,0,0,-0.571685476809948,0.318224732989838,-0.088431868366195,-0.0168559379652944,-0.0106353007685752,-0.0942399002049195,-0.12412642394702,-0.159350417199154,-0.014622964877945,-0.088431868366195,-0.088431868366195,0,0.0626846309552702,0,0,0.12289117231394,0.179181304986894,0,0.051740138469672,0,0.0211990427648257,0.0534793295516895,0.237681638213454,0,0.00279942818750001,0.0197672872291507,0.0491983282189966,0.141398633880724,0.320947950056456,0,0,0.0411416190327164,0.139702194857094,0.131758108741384,0.195102064783501,0.231488749708159,0.0273048541741464,0.42722012159992,0.930976569021053,0.487996946996128,0.216734783017248,0.186982736857823,0.224909730421251,0.163122506430192,0.837688312930212,0,-0.379013109192209,-0.130993373719269,-0.325390419591629,-0.554057872706666,-0.542801340395559,-0.55575237101744,-0.451124924014828,-0.391935216126381,-0.384231398173621,1.61381556156325,0,0.13809325567664,0.36735187758216,0.604273404219184,0.742385740490067,0.871684085289041,0.952149436534127,1.30030865506943,1.19610777578359,0.565919270449076,0,-0.209879534618044,-0.0920718129964795,0,0,0,0,-0.110770749497502,-0.13285241103407,0,0,-0.429361095209637,0,-0.0434634721313038,-0.208241527075018,-0.157372331270244,-0.229537414539669,-0.286499902025228,-0.268958861526975,-0.420781164367436,-0.425334274727308,-0.434534027861256,-0.390977241875891,-0.374610755133821,-0.372305428213352,0.292866092678888,0.155546221014079,0.00058778998519249,0.286596630856382,0.426485486373173,0.40698555759196,0.868772224412316,0.491636682150353,1.01337492485289,-0.00426826163552519,0,0,0.025178792124282,0,-0.017363026185263,0,0,0,0.00216972772229277,0,0,0,0.0472542065752338,-0.0180816594585277,0.0436459703901125,0.208688879551427,0.161937593245448,-0.00515458894538255,0.157883936511896,0.102848187102978,0.101046064031737,0.134405006467621,0.113935353468324,0.179447313185155,0.212070598544375,0.124635710211526,0.173483811102859,0.152169564022343,0.158843797677303,0.129184037515389,0.103502329137696,0.128443148621204,0.0855920601246166,0.109450805773025,0.16551647849482,0.146732734101372,0.0302975718151188,0.108832111953044,0.101463266594974,0.171386045209451,0.132736965371945,0.160091995199265,0.175036908626579,0.0961321147384052,0.150432717288955,0.188844398329957,0.184936095555763,0.101105703691886,0.144290989433839,0.106283867981338|gostat_on_MCL_coexpression=|ontology_enrichment_celltype=|ontology_enrichment_disease=|ontology_enrichment_uberon=UBERON:0000160!4.48e-15!31;UBERON:0005409!4.77e-13!47;UBERON:0000344!2.93e-10!15;UBERON:0001242!5.73e-09!13;UBERON:0000060!5.73e-09!13;UBERON:0001262!5.73e-09!13;UBERON:0004786!5.73e-09!13|tfbs_overrepresentation_for_novel_motifs=0.491922,0.473747,0.464605,0.535892,0.346849,0.550971,2.63377,0.691572,0.257202,0.283981,0.599767,0.632897,1.28144,0.6581,0.364314,0,0.856992,0.338549,1.90111,1.3999,0.426133,0.35122,0.657163,0.345236,2.0696,0.686615,0.223823,0.572827,0.394364,1.0231,0.558142,0.960397,1.60284,0.589948,0.364821,0.144368,2.38064,0.629145,0.303703,0.27383,0.342638,0.56353,0.0995018,0.366415,0.368882,0.524258,0.77511,0.589246,0.0835644,1.02809,0.839084,0.714419,0.174327,1.10437,1.12205,0.66551,0.406788,0.619643,0.614918,0.663395,0.939962,0.724164,0.742129,0.827522,0.677043,0.869046,1.2599,1.61148,0.935192,1.46355,0.444872,0.70565,0.366795,1.156,3.30442,1.08629,0.589776,0.763395,0.922432,0.430551,0.708505,0.874787,0.722675,0.240896,1.03903,0.0539203,0.0610418,0.181203,0.780154,1.77427,1.33021,1.04409,0.973447,0.9304,0.2995,0.281222,0.244935,0.976308,0.775372,0.483322,0.326561,0.960112,1.08669,0.839694,0.838613,0.563071,0.8998,0.585058,1.11115,1.92,0.484547,1.0885,0.431734,0.605144,1.33732,0.90315,0.247162,0.53982,0.858327,0.322606,1.16147,0.805995,1.6461,0.762461,1.39185,0.926209,0.65384,0.966541,1.25836,0.356163,1.06946,0.52828,1.2285,0.679647,1.35909,0.106956,0.500709,0.564999,1.30952,2.14327,1.74232,1.26465,0.700956,0.971067,0.831964,0.564002,0.778321,2.10357,1.25623,0.348692,0.540361,0.325363,1.10596,0.287383,0.678689,1.18867,0.71546,0.376898,0.48935,0.500417,1.31911,1.03816,0.926663,0.482185,0.82857,0.671017,0.325308,0.63125,0.30995|tfbs_overrepresentation_jaspar=MA0003.1;0.476238,MA0004.1;0.536396,MA0006.1;0.359699,MA0007.1;0.52077,MA0009.1;0.987341,MA0014.1;2.21808,MA0017.1;0.387481,MA0019.1;1.87871,MA0024.1;0.942716,MA0025.1;1.22395,MA0027.1;2.64231,MA0028.1;0.370592,MA0029.1;0.920529,MA0030.1;0.927235,MA0031.1;0.890871,MA0038.1;0.686534,MA0040.1;1.00009,MA0041.1;0.457338,MA0042.1;0.443591,MA0043.1;1.08567,MA0046.1;1.02391,MA0048.1;2.87934,MA0050.1;0.57678,MA0051.1;0.695779,MA0052.1;1.00829,MA0055.1;0.212634,MA0056.1;0,MA0057.1;0.149949,MA0058.1;0.436487,MA0059.1;0.449345,MA0060.1;0.757042,MA0061.1;0.307097,MA0063.1;0,MA0066.1;0.675169,MA0067.1;1.33603,MA0068.1;0.153907,MA0069.1;1.00864,MA0070.1;0.998765,MA0071.1;0.575909,MA0072.1;0.990133,MA0073.1;2.47041,MA0074.1;0.638014,MA0076.1;0.407465,MA0077.1;0.968053,MA0078.1;0.729877,MA0081.1;0.473489,MA0083.1;1.08487,MA0084.1;1.66561,MA0087.1;1.04109,MA0088.1;0.111145,MA0089.1;0,MA0090.1;0.500693,MA0091.1;0.55008,MA0092.1;0.501022,MA0093.1;0.379257,MA0095.1;0,MA0098.1;0,MA0100.1;0.626021,MA0101.1;1.16089,MA0103.1;1.82037,MA0105.1;0.199622,MA0106.1;0.737893,MA0107.1;1.0169,MA0108.2;0.824407,MA0109.1;0,MA0111.1;0.515457,MA0113.1;0.708789,MA0114.1;1.49046,MA0115.1;1.08851,MA0116.1;0.359483,MA0117.1;1.05576,MA0119.1;2.02544,MA0122.1;1.07591,MA0124.1;1.28237,MA0125.1;1.20757,MA0130.1;0,MA0131.1;0.796279,MA0132.1;0,MA0133.1;0,MA0135.1;1.1226,MA0136.1;0.658622,MA0139.1;0.243463,MA0140.1;0.625902,MA0141.1;0.419361,MA0142.1;0.876028,MA0143.1;0.725672,MA0144.1;0.307873,MA0145.1;0.379391,MA0146.1;0.353523,MA0147.1;0.320675,MA0148.1;0.553294,MA0149.1;0.464445,MA0062.2;0.204999,MA0035.2;0.630778,MA0039.2;1.76222,MA0138.2;0.788113,MA0002.2;0.246463,MA0137.2;0.416331,MA0104.2;0.261255,MA0047.2;0.685741,MA0112.2;0.119197,MA0065.2;0.119561,MA0150.1;0.520653,MA0151.1;0,MA0152.1;0.685852,MA0153.1;1.13945,MA0154.1;0.933846,MA0155.1;0.132921,MA0156.1;0.406559,MA0157.1;0.843181,MA0158.1;0,MA0159.1;0.881902,MA0160.1;0.556423,MA0161.1;0,MA0162.1;0.70356,MA0163.1;0.0423021,MA0164.1;0.658997,MA0080.2;0.393257,MA0018.2;1.60558,MA0099.2;0.781628,MA0079.2;0.911432,MA0102.2;1.7182,MA0258.1;0.290587,MA0259.1;0.309517,MA0442.1;0}}
|coexpression_dpi_cluster_scores_mean=0.17146588050298,1.27486546493968,1.23789365417421,1.07571339020977,1.09061919772217,1.02851025086154,1.04186150690272,-0.566718784505596,-0.284531113090527,-0.27524788111396,-0.584165887619185,-0.54358098402234,-0.577043171886952,-0.56485965708975,-0.436525262945286,-0.438672508166584,-0.299692621000263,-0.507682837811549,-0.474791425582057,-0.47427858449478,0.352983209549862,-0.600193020932937,-0.607045129782077,1.28824031794331,1.31765632614443,1.32331902117652,1.30039297611993,1.2584739001145,1.30853205966777,1.19954791378744,1.45265719480794,-0.361684066406082,-0.458681576895309,-0.607045129782077,0.505891509785219,0.638088933765961,0.434044082138678,-0.329596143158344,-0.285849783146964,-0.33002858375844,-0.226130163056353,-0.292760245084966,-0.233510176594182,-0.386498470774165,-0.360123143304201,-0.390192699050857,-0.0538207734469207,0.20802754429253,0.208300878624438,0.152230389805,0.0428026602759303,0.219182801220815,-0.425103688977309,-0.523396411163004,-0.508159777100437,-0.0532521525335567,-0.179927645360034,-0.0550971542089024,0.138501299725031,0.136430512940553,0.0529957751369318,0.0156180943765297,-0.100795370014282,-0.363852431496677,-0.307582747788589,-0.351573401240126,0.0783586611809332,0.238876963229443,0.0585874140520945,0.0248834406965003,0.0152793702544922,-0.0103440961295559,-0.0465003190945559,0.00982909065128815,-0.0723419978871745,-0.089512390736126,-0.00915122849542001,0.00500548384665834,-0.0360022923050707,0.0892134339491426,-0.00743955408154305,0.0392678157658185,0.112852993541988,0.0113701651368858,0.0560483698739378,-0.056181220729165,-0.0656782593625928,0.0809678591486858,-0.157983792373116,-0.131807981268049,0.249870137810301,-0.106664792252294,0.075102812409758,0.0748200967833587,-0.0609491173970475,-0.102127536675194,0.522906316473753,-0.585814522410162,-0.522325318308431,-0.607045129782077,0.231902562669383,-0.607045129782077,-0.607045129782077,-0.607045129782077,0.659338068540806,0.665838129505616,0.679525182597152,0.699431383267714,-0.538923617570759,-0.180243571229893,-0.197682602997864,-0.180090708048747,-0.131092505892011,-0.162577183384952,-0.156804890784014,-0.347080644999937,0.229210125709255,-0.385311269995802,-0.088199205628733,0.147298964899036,0.100295297738733,0.0238299443125651,1.27294993304917,0.282480174214287,0.361988960750677,1.19756078697125,-0.553720781208189,-0.498510738459009,-0.56090706133271,-0.0797497940948454,0.0431993626497008,-0.0134185852397999,0.0164920666051027,0.0133287668252179,-0.0241295948579756,-0.0388832808182493,-0.0243878162328297,0.213098429470027,0.539941599656858,0.272043823877563,-0.222771729898027,-0.0987002550612853,-0.122680291170103,-0.0989232546290844,-0.18195517474281,-0.161201545375812,-0.13745431688428,-0.00327171800799316,-0.127739456909881,-0.125230311181856,-0.087362050622654,-0.113242106551495,-0.177775048313065,0.126168709070659,-0.191034565094898,-0.172873017968957,-0.607045129782077,-0.546936654692014,-0.510478685022152,-0.186381365636397,-0.132850550575014,-0.145023468334501,-0.0976703465567709,-0.104298826332903,-0.143081266820494,-0.129405101114406,-0.121399543875862,-0.0939026245597624,-0.106879350026764,-0.103734901774771,-0.0939402103085863,-0.0604995850795495,-0.0666584607211337,-0.0530355447184708,0.0514965957907141,-0.0702185564370992,1.54512647333377,1.17607528201856,-0.15097284445336,-0.0461601192622903,0.0838000948186645,0.219905350404967,0.366858180121299,0.53565994384085,1.07952445581387,0.52529775982888,0.582380332295236,0.658366942315988,0.665373416323861,1.01144694399047,1.0981732008926,1.06384233123681,-0.0215701039676327,-0.0109654960381358,0.0988753396210443,0.0772008468213536,0.161724401121526,0.160823205397813,0.284458384724372,0.288276741376389,0.31188381972984,0.330883889263794,-0.0297679061157028,-0.452857735000687,-0.464797515870434,-0.470166395608946,-0.398318573485901,-0.384292725743084,-0.249016927873537,-0.188502817425558,-0.281598077461287,-0.193752566519711,-0.235902512357397,-0.129965672929075,-0.146460771305312,-0.229965320750589,-0.136990911740155,-0.193331325376376,0.25780048853836,-0.0667505088834572,-0.120200704746074,-0.112108327205795,-0.0594631162929547,-0.00215645015456697,0.0535089085078736,0.155816369549337,-0.0132210382653707,0.066029771309863,0.0793527564758039,0.182036100914809,0.218090948684428,0.218974794572381,-0.473940983500123,-0.522326459126651,0.00558326499020141,-0.154845349666601,0.0364003947467202,-0.0184975469284857,-0.546396786787261,0.392175421748419,-0.180164305494152,-0.107156421472534,-0.193776114108586,-0.314837590390371,-0.305976641375574,-0.345120776401584,-0.159736986583757,-0.194453537234455,-0.265089180292899,0.00313143816157249,0.0893563287869995,-0.0440897974309412,-0.0839187523775285,0.159234057180088,0.217933518004034,0.0476259149159275,0.0764939958471036,0.0243308391460525,0.0834439993019916,0.11341163094522,0.300990454913587,0.0556823789697354,0.0454837729928215,0.0288627915299766,0.120697645454343,0.177019355278742,0.307459438364383,0.0375961780533485,0.191838661332041,0.211711047607826,0.210690170319964,0.175476130266974,0.169574451013547,0.16760213579999,0.288688555564537,0.367048202514611,0.84464813063563,0.322261316226075,0.0184707085061062,-0.00893214236587649,0.161385023425211,0.178405136291638,0.865952191779299,-0.00650175386128,-0.419807295648915,-0.266851555368636,-0.424500821646134,-0.540520918752834,-0.510001314178647,-0.527038034556386,-0.416753922617509,-0.419170574644898,-0.360312101548369,1.65898609452968,-0.0893869176346565,0.134981414094154,0.386088474828466,0.673939551768185,0.843222905591973,0.917478817044802,0.960202554269244,1.33931003079188,1.18118083837117,0.518297672248729,0.0660085891201403,-0.366329107007975,-0.213193679374035,-0.0585856448021038,-0.0774900001549267,-0.11612093805799,-0.0896849302166814,-0.1392881367706,-0.23704233646357,-0.181710941254455,0.0616806064822333,-0.4092591350263,-0.246416034998257,-0.303868972957152,-0.441526349277549,-0.349864409044971,-0.358125620240978,-0.422022941815561,-0.440888062163718,-0.455392463716149,-0.465780185298303,-0.474626559631428,-0.399874221802137,-0.414949212080388,-0.433317619969202,0.243704304771416,0.1488614997664,0.0203552712408404,0.251003288036094,0.459684156786954,0.359370260243409,0.753121356280708,0.424346372841259,1.00494168035233,-0.0296177266486887,-0.0371959440110532,-0.0289091517619785,0.0754854687491767,-0.0128015672494945,-0.0591115307189728,-0.0187052727945502,0.0669647771274844,0.0722954454224709,0.0594237865178101,-0.221399125628954,0.00977385517175433,-0.0379177448102987,-0.0473264659895586,-0.0801244132975176,0.0437043259890195,0.199114443457834,0.130236469004871,0.0795151254481926,0.199099946458759,0.130575351494669,0.0907805916821573,0.153666662467392,0.138543629273241,0.137177054700506,0.167209195079532,0.10386743345885,0.152392082489448,0.18897640849151,0.1449893104359,0.152165080627697,0.112404887501007,0.0906720501371186,0.103825210037142,0.114563270833112,0.121413864615084,0.157219239738836,0.0395596375709603,0.0965186535846183,0.104576607762393,0.149126061321275,0.125581339297411,0.119233242831339,0.157075302585066,0.123746714309551,0.094189069269513,0.188306640592984,0.150767760099825,0.124837761202696,0.166668390066642,0.152425035421624
|coexpression_dpi_cluster_scores_median=0.0890885102666595,1.25524906125364,1.28761508400137,1.05557139111423,1.04584119122132,1.04100204435881,1.0156035901304,-0.566468902430624,-0.137337634919606,-0.139869174400861,-0.6032461841587,-0.564677798084736,-0.60680357288119,-0.602575536339325,-0.352937014750106,-0.37734005928894,-0.267188064404155,-0.53134814153484,-0.46302055648172,-0.432145274862937,0.34092210419056,-0.60680357288119,-0.60680357288119,1.20743223758257,1.27945002398446,1.35376108996615,1.3190003382654,1.24790794201364,1.29244961082225,1.20146879782168,1.43855810325058,-0.088431868366195,-0.161712914220887,-0.60680357288119,0.493826279276093,0.737675067508353,0.470707224984425,-0.24044095084723,-0.1465496010711,-0.280057113282192,-0.088431868366195,-0.191789295675993,-0.0937269569013565,-0.25496628139106,-0.245768840378416,-0.124311956084907,-0.076302559375353,0,0,0,0,0,-0.180270460803713,-0.386618891545818,-0.52592254831276,0,-0.088431868366195,-0.0223358046408003,0.051276580335957,0.124118137115786,0.0181717512740323,0,0,-0.244094241980889,-0.153848962471015,-0.131901481495964,0,0,0,0,0,0,0,0,0,-0.0671450951364075,0,0,0,0,0,0,0,0,0,-0.00602649653030395,-0.00511188783094195,0.0310671898239947,-0.088431868366195,-0.0310786423886855,0.229711836975522,-0.0147204050047444,0,0.0052866366438181,-0.0470398000691511,-0.0680291517459733,0.472340400113766,-0.60680357288119,-0.549619461030207,-0.60680357288119,0.229322281896598,-0.60680357288119,-0.60680357288119,-0.60680357288119,0.796445686450809,0.797431532799352,0.763308258783037,0.643699917900166,-0.587562896191352,-0.058377308660695,-0.0179110380821061,-0.088431868366195,-0.0547994183661987,-0.057946539389305,-0.048744404311079,-0.272485424492016,0.120570662761607,-0.216863857456756,0,0.0892948862730207,0.00969086577641165,0,1.26525147496596,0.362893675971137,0.526983017250698,1.16933294779128,-0.540122692353943,-0.530074121691611,-0.58839195896238,0,0,0.0202625513203502,-0.0236435296228335,0.00126228212861565,0,0,0,0.18427992066198,0.663017968396405,0.305153543316664,0,0,0,0.0597571272710892,-0.000350995837235191,-0.0762030834655285,-0.0561690917053955,0,0,0,0,0,0.096017983637161,0.353575036173736,0.126811471058335,0,-0.60680357288119,-0.547402334767943,-0.539846737946774,-0.133818923198304,-0.0679207429396455,-0.0428657874415998,-0.0590741678325672,0,-0.0572787073578265,-0.0430324239393145,-0.0246329769398294,0,0,0,0,0,0,0,0.00417076205365596,0,1.5708373795838,1.16640608932309,0,-0.0634831869297695,0.0263214775189998,0.191322065210199,0.301843442667787,0.530895546852736,1.10548956206539,0.477221752606278,0.60487876596747,0.642004406183116,0.642610919306993,1.08417465057968,1.13259159173745,1.10298786633095,0,0,0.126131055930957,0.0174500263436732,0.057600656555373,0.120148129138903,0.251102364611865,0.210615144836002,0.253174411020555,0.247574526204721,0.0039159305919197,-0.407694122159059,-0.280715174521557,-0.482117274290115,-0.433904984127944,-0.386994700703943,-0.139486486053465,-0.133131384712897,-0.21504694544904,-0.137061936310535,-0.274893251390313,-0.0197325059568339,-0.118541542731853,-0.140126593308502,-0.0878490797539099,-0.155634791441119,0.233039271316756,0,-0.0648742979348074,-0.139608910450384,-0.0730743777193618,0,0.0203123840622444,0.134647175908174,-0.0053964903424788,0.0621187734420416,0.0720256629102474,0.0991889283755564,0.16203489628373,0.134715576150255,-0.407147353458259,-0.512493189858079,-0.00158176745981027,-0.03551729583339,0,0,-0.571685476809948,0.318224732989838,-0.088431868366195,-0.0168559379652944,-0.0106353007685752,-0.0942399002049195,-0.12412642394702,-0.159350417199154,-0.014622964877945,-0.088431868366195,-0.088431868366195,0,0.0626846309552702,0,0,0.12289117231394,0.179181304986894,0,0.051740138469672,0,0.0211990427648257,0.0534793295516895,0.237681638213454,0,0.00279942818750001,0.0197672872291507,0.0491983282189966,0.141398633880724,0.320947950056456,0,0,0.0411416190327164,0.139702194857094,0.131758108741384,0.195102064783501,0.231488749708159,0.0273048541741464,0.42722012159992,0.930976569021053,0.487996946996128,0.216734783017248,0.186982736857823,0.224909730421251,0.163122506430192,0.837688312930212,0,-0.379013109192209,-0.130993373719269,-0.325390419591629,-0.554057872706666,-0.542801340395559,-0.55575237101744,-0.451124924014828,-0.391935216126381,-0.384231398173621,1.61381556156325,0,0.13809325567664,0.36735187758216,0.604273404219184,0.742385740490067,0.871684085289041,0.952149436534127,1.30030865506943,1.19610777578359,0.565919270449076,0,-0.209879534618044,-0.0920718129964795,0,0,0,0,-0.110770749497502,-0.13285241103407,0,0,-0.429361095209637,0,-0.0434634721313038,-0.208241527075018,-0.157372331270244,-0.229537414539669,-0.286499902025228,-0.268958861526975,-0.420781164367436,-0.425334274727308,-0.434534027861256,-0.390977241875891,-0.374610755133821,-0.372305428213352,0.292866092678888,0.155546221014079,0.00058778998519249,0.286596630856382,0.426485486373173,0.40698555759196,0.868772224412316,0.491636682150353,1.01337492485289,-0.00426826163552519,0,0,0.025178792124282,0,-0.017363026185263,0,0,0,0.00216972772229277,0,0,0,0.0472542065752338,-0.0180816594585277,0.0436459703901125,0.208688879551427,0.161937593245448,-0.00515458894538255,0.157883936511896,0.102848187102978,0.101046064031737,0.134405006467621,0.113935353468324,0.179447313185155,0.212070598544375,0.124635710211526,0.173483811102859,0.152169564022343,0.158843797677303,0.129184037515389,0.103502329137696,0.128443148621204,0.0855920601246166,0.109450805773025,0.16551647849482,0.146732734101372,0.0302975718151188,0.108832111953044,0.101463266594974,0.171386045209451,0.132736965371945,0.160091995199265,0.175036908626579,0.0961321147384052,0.150432717288955,0.188844398329957,0.184936095555763,0.101105703691886,0.144290989433839,0.106283867981338
|gostat_on_MCL_coexpression=
|ontology_enrichment_celltype=
|ontology_enrichment_disease=
|ontology_enrichment_uberon=UBERON:0000160!4.48e-15!31;UBERON:0005409!4.77e-13!47;UBERON:0000344!2.93e-10!15;UBERON:0001242!5.73e-09!13;UBERON:0000060!5.73e-09!13;UBERON:0001262!5.73e-09!13;UBERON:0004786!5.73e-09!13
|tfbs_overrepresentation_for_novel_motifs=0.491922,0.473747,0.464605,0.535892,0.346849,0.550971,2.63377,0.691572,0.257202,0.283981,0.599767,0.632897,1.28144,0.6581,0.364314,0,0.856992,0.338549,1.90111,1.3999,0.426133,0.35122,0.657163,0.345236,2.0696,0.686615,0.223823,0.572827,0.394364,1.0231,0.558142,0.960397,1.60284,0.589948,0.364821,0.144368,2.38064,0.629145,0.303703,0.27383,0.342638,0.56353,0.0995018,0.366415,0.368882,0.524258,0.77511,0.589246,0.0835644,1.02809,0.839084,0.714419,0.174327,1.10437,1.12205,0.66551,0.406788,0.619643,0.614918,0.663395,0.939962,0.724164,0.742129,0.827522,0.677043,0.869046,1.2599,1.61148,0.935192,1.46355,0.444872,0.70565,0.366795,1.156,3.30442,1.08629,0.589776,0.763395,0.922432,0.430551,0.708505,0.874787,0.722675,0.240896,1.03903,0.0539203,0.0610418,0.181203,0.780154,1.77427,1.33021,1.04409,0.973447,0.9304,0.2995,0.281222,0.244935,0.976308,0.775372,0.483322,0.326561,0.960112,1.08669,0.839694,0.838613,0.563071,0.8998,0.585058,1.11115,1.92,0.484547,1.0885,0.431734,0.605144,1.33732,0.90315,0.247162,0.53982,0.858327,0.322606,1.16147,0.805995,1.6461,0.762461,1.39185,0.926209,0.65384,0.966541,1.25836,0.356163,1.06946,0.52828,1.2285,0.679647,1.35909,0.106956,0.500709,0.564999,1.30952,2.14327,1.74232,1.26465,0.700956,0.971067,0.831964,0.564002,0.778321,2.10357,1.25623,0.348692,0.540361,0.325363,1.10596,0.287383,0.678689,1.18867,0.71546,0.376898,0.48935,0.500417,1.31911,1.03816,0.926663,0.482185,0.82857,0.671017,0.325308,0.63125,0.30995
|tfbs_overrepresentation_jaspar=MA0003.1;0.476238,MA0004.1;0.536396,MA0006.1;0.359699,MA0007.1;0.52077,MA0009.1;0.987341,MA0014.1;2.21808,MA0017.1;0.387481,MA0019.1;1.87871,MA0024.1;0.942716,MA0025.1;1.22395,MA0027.1;2.64231,MA0028.1;0.370592,MA0029.1;0.920529,MA0030.1;0.927235,MA0031.1;0.890871,MA0038.1;0.686534,MA0040.1;1.00009,MA0041.1;0.457338,MA0042.1;0.443591,MA0043.1;1.08567,MA0046.1;1.02391,MA0048.1;2.87934,MA0050.1;0.57678,MA0051.1;0.695779,MA0052.1;1.00829,MA0055.1;0.212634,MA0056.1;0,MA0057.1;0.149949,MA0058.1;0.436487,MA0059.1;0.449345,MA0060.1;0.757042,MA0061.1;0.307097,MA0063.1;0,MA0066.1;0.675169,MA0067.1;1.33603,MA0068.1;0.153907,MA0069.1;1.00864,MA0070.1;0.998765,MA0071.1;0.575909,MA0072.1;0.990133,MA0073.1;2.47041,MA0074.1;0.638014,MA0076.1;0.407465,MA0077.1;0.968053,MA0078.1;0.729877,MA0081.1;0.473489,MA0083.1;1.08487,MA0084.1;1.66561,MA0087.1;1.04109,MA0088.1;0.111145,MA0089.1;0,MA0090.1;0.500693,MA0091.1;0.55008,MA0092.1;0.501022,MA0093.1;0.379257,MA0095.1;0,MA0098.1;0,MA0100.1;0.626021,MA0101.1;1.16089,MA0103.1;1.82037,MA0105.1;0.199622,MA0106.1;0.737893,MA0107.1;1.0169,MA0108.2;0.824407,MA0109.1;0,MA0111.1;0.515457,MA0113.1;0.708789,MA0114.1;1.49046,MA0115.1;1.08851,MA0116.1;0.359483,MA0117.1;1.05576,MA0119.1;2.02544,MA0122.1;1.07591,MA0124.1;1.28237,MA0125.1;1.20757,MA0130.1;0,MA0131.1;0.796279,MA0132.1;0,MA0133.1;0,MA0135.1;1.1226,MA0136.1;0.658622,MA0139.1;0.243463,MA0140.1;0.625902,MA0141.1;0.419361,MA0142.1;0.876028,MA0143.1;0.725672,MA0144.1;0.307873,MA0145.1;0.379391,MA0146.1;0.353523,MA0147.1;0.320675,MA0148.1;0.553294,MA0149.1;0.464445,MA0062.2;0.204999,MA0035.2;0.630778,MA0039.2;1.76222,MA0138.2;0.788113,MA0002.2;0.246463,MA0137.2;0.416331,MA0104.2;0.261255,MA0047.2;0.685741,MA0112.2;0.119197,MA0065.2;0.119561,MA0150.1;0.520653,MA0151.1;0,MA0152.1;0.685852,MA0153.1;1.13945,MA0154.1;0.933846,MA0155.1;0.132921,MA0156.1;0.406559,MA0157.1;0.843181,MA0158.1;0,MA0159.1;0.881902,MA0160.1;0.556423,MA0161.1;0,MA0162.1;0.70356,MA0163.1;0.0423021,MA0164.1;0.658997,MA0080.2;0.393257,MA0018.2;1.60558,MA0099.2;0.781628,MA0079.2;0.911432,MA0102.2;1.7182,MA0258.1;0.290587,MA0259.1;0.309517,MA0442.1;0
}}

Latest revision as of 16:51, 17 September 2013


Phase1 CAGE Peaks

 Short description
Mm9::chr16:97726499..97726522,-p2@Fam3b
Mm9::chr16:97726532..97726550,-p1@Fam3b
Mm9::chr18:36508307..36508382,+p1@0610010O12Rik
Mm9::chr18:36508393..36508433,+p2@0610010O12Rik
Mm9::chr4:129952767..129952781,-p2@Serinc2
Mm9::chr4:129952786..129952834,-p1@Serinc2


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data

no results for this coexpression

Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>

Uber Anatomy
Ontology termp-valuen
intestine4.48e-1531
gastrointestinal system4.77e-1347
mucosa2.93e-1015
intestinal mucosa5.73e-0913
anatomical wall5.73e-0913
wall of intestine5.73e-0913
gastrointestinal system mucosa5.73e-0913


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


Motifs-log10(p-value)
MA0003.10.476238
MA0004.10.536396
MA0006.10.359699
MA0007.10.52077
MA0009.10.987341
MA0014.12.21808
MA0017.10.387481
MA0019.11.87871
MA0024.10.942716
MA0025.11.22395
MA0027.12.64231
MA0028.10.370592
MA0029.10.920529
MA0030.10.927235
MA0031.10.890871
MA0038.10.686534
MA0040.11.00009
MA0041.10.457338
MA0042.10.443591
MA0043.11.08567
MA0046.11.02391
MA0048.12.87934
MA0050.10.57678
MA0051.10.695779
MA0052.11.00829
MA0055.10.212634
MA0056.10
MA0057.10.149949
MA0058.10.436487
MA0059.10.449345
MA0060.10.757042
MA0061.10.307097
MA0063.10
MA0066.10.675169
MA0067.11.33603
MA0068.10.153907
MA0069.11.00864
MA0070.10.998765
MA0071.10.575909
MA0072.10.990133
MA0073.12.47041
MA0074.10.638014
MA0076.10.407465
MA0077.10.968053
MA0078.10.729877
MA0081.10.473489
MA0083.11.08487
MA0084.11.66561
MA0087.11.04109
MA0088.10.111145
MA0089.10
MA0090.10.500693
MA0091.10.55008
MA0092.10.501022
MA0093.10.379257
MA0095.10
MA0098.10
MA0100.10.626021
MA0101.11.16089
MA0103.11.82037
MA0105.10.199622
MA0106.10.737893
MA0107.11.0169
MA0108.20.824407
MA0109.10
MA0111.10.515457
MA0113.10.708789
MA0114.11.49046
MA0115.11.08851
MA0116.10.359483
MA0117.11.05576
MA0119.12.02544
MA0122.11.07591
MA0124.11.28237
MA0125.11.20757
MA0130.10
MA0131.10.796279
MA0132.10
MA0133.10
MA0135.11.1226
MA0136.10.658622
MA0139.10.243463
MA0140.10.625902
MA0141.10.419361
MA0142.10.876028
MA0143.10.725672
MA0144.10.307873
MA0145.10.379391
MA0146.10.353523
MA0147.10.320675
MA0148.10.553294
MA0149.10.464445
MA0062.20.204999
MA0035.20.630778
MA0039.21.76222
MA0138.20.788113
MA0002.20.246463
MA0137.20.416331
MA0104.20.261255
MA0047.20.685741
MA0112.20.119197
MA0065.20.119561
MA0150.10.520653
MA0151.10
MA0152.10.685852
MA0153.11.13945
MA0154.10.933846
MA0155.10.132921
MA0156.10.406559
MA0157.10.843181
MA0158.10
MA0159.10.881902
MA0160.10.556423
MA0161.10
MA0162.10.70356
MA0163.10.0423021
MA0164.10.658997
MA0080.20.393257
MA0018.21.60558
MA0099.20.781628
MA0079.20.911432
MA0102.21.7182
MA0258.10.290587
MA0259.10.309517
MA0442.10
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=MCL_coexpression_mm9:1390&oldid=3073389"