NonredundantMotifs:105: Difference between revisions
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|entrez_gene_id=
|motif_cluster_2013_march_motif_members= /SWISSREGULON:ZBTB6.p2 /HOCOMOCO:ZBTB6_si
|name=known105
|representative_motif_db=SWISSREGULON
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{{Known_motif | {{Known_motif | ||
|entrez_gene_id= | |PWM=P0;A;C;G;T!1;12.75695;77.460159;21.485302;37.261027!2;8.830129;2.961378;136.192844;0.979087!3;0;0.976179;137.270769;10.71649!4;0;148.963438;0;0!5;2.931264;0.958473;2.977262;142.096439!6;0;147.03159;0;1.931848!7;0;123.45013;0;25.513308!8;132.207838;7.86924;4.940504;3.945856!9;0.988561;11.790552;46.043254;90.141071!10;0.975995;104.842439;34.313017;8.831987!11;59.88888;0;32.285969;56.788589!12;0;99.793419;0;49.170019!13;3.908848;132.321212;7.845091;4.888287 | ||
|motif_cluster_2013_march_motif_members= /SWISSREGULON:ZBTB6. | |entrez_gene_id=10773 | ||
|name= | |motif_cluster_2013_march_motif_members= /HOCOMOCO:ZBTB6_si /SWISSREGULON:ZBTB6.p2 | ||
|name=non-redundant105 | |||
|representative_motif_db=SWISSREGULON | |representative_motif_db=SWISSREGULON | ||
|representative_motif_id=ZBTB6.p2 | |representative_motif_id=ZBTB6.p2 | ||
|representative_motif_name= | |representative_motif_name=ZBTB6 | ||
|score=0.9547179249257121 | |score=0.9547179249257121 | ||
|uniprot_entry_name= | |uniprot_entry_name=ZBTB6 | ||
}} | }} | ||
[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 15:46, 31 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant105
- db :SWISSREGULON
- Id :ZBTB6.p2
- name :ZBTB6
- score :0.9547179249257121
- External refs:
- Internal refs:
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Sub Motif Members
