NonredundantMotifs:138: Difference between revisions
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|entrez_gene_id=8320
|motif_cluster_2013_march_motif_members= /HOCOMOCO:EOMES_f1
|name=known138
|representative_motif_db=HOCOMOCO
|representative_motif_id=...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;3.484218854431249;68.59548921182741;2.2683419162418605;2.403542824407404!2;3.4024372799311644;1.5084188298734926;67.59507470311007;4.245661993993136!3;2.3146375226158487;0.6079384690946936;70.97143868887879;2.857578126318588!4;3.9750409697630147;2.108433182240031;65.74355142529802;4.924567229606811!5;3.4762947377030935;1.8123880644208399;67.35701965284132;4.10589035194265!6;70.3101123820767;2.116357298968187;3.1723255031557462;1.1527976227072707!7;0.9635596762609163;1.823815407284083;2.5824785493481177;71.3817391740148!8;70.06770240981795;2.0195278804484755;3.092864371285873;1.5714981453556107!9;0.9635596762609163;73.60859651619668;0.0;2.1794366144503052!10;0.9635596762609163;0.6079384690946936;72.14040231607878;3.039692345473464!11;73.96421772336292;0.9635596762609163;1.2158769381893888;0.6079384690946936!12;75.04489375338675;0.0;1.7066990535211544;0.0!13;74.7320649264594;0.6079384690946936;1.4115894113537812;0.0!14;0.0;0.9635596762609163;1.7066990535211544;74.08133407712579 | |||
|entrez_gene_id=8320 | |entrez_gene_id=8320 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:EOMES_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:EOMES_f1 | ||
|name= | |name=non-redundant138 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=EOMES_f1 | |representative_motif_id=EOMES_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant138
- db :HOCOMOCO
- Id :EOMES_f1
- name :
- score :0.011992483613238743
- External refs:
- Internal refs:
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Sub Motif Members
