FFCP PHASE1:Hg19::chr6:161454912..161454955,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:161454912..161454955,+
|short_description=p5@MAP3K4
|description=CAGE_peak_5_at_MAP3K4_5end
|association_with_transcript=-434bp_to_ENST00000446500_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4216 | |EntrezGene=4216 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6856 | |HGNC=6856 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-434bp_to_ENST00000446500_5end | |||
|cluster_id=chr6:161454912..161454955,+ | |||
|coexpression_cluster_id=C4580 | |||
|description=CAGE_peak_5_at_MAP3K4_5end | |||
|id=chr6:161454912..161454955,+ | |||
|ontology_enrichment_celltype=CL:0002251!2.48e-11!21;CL:0002076!5.20e-08!43;CL:0000080!7.08e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:1001319;8.85e-13;1!CL:1000600;8.85e-13;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,8.85e-13,1;CL:1000600,8.85e-13,1 | |||
|ontology_enrichment_development_v019=UBERON:0000358;2.91e-12;1 | |||
|ontology_enrichment_disease=DOID:1749!9.94e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:0060060;4.31e-12;1!DOID:0060061;4.31e-12;1!DOID:8691;4.31e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,3.85e-12,1;DOID:0060061,3.85e-12,1;DOID:8691,3.85e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0003729!1.63e-09!5;UBERON:0000974!2.10e-09!10;UBERON:0000161!1.92e-07!35;UBERON:0003343!2.86e-07!4;UBERON:0004785!2.86e-07!4;UBERON:0000166!3.51e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;5.57e-18;10!UBERON:0004645;8.85e-13;1!UBERON:0001256;8.85e-13;1!UBERON:0001259;8.85e-13;1!UBERON:0000365;8.13e-10;5!UBERON:0005910;2.52e-08;6!UBERON:0000478;1.27e-07;24!UBERON:0000178;2.98e-07;15!UBERON:0000179;2.98e-07;15!UBERON:0000463;2.98e-07;15!UBERON:0001255;5.11e-07;2!UBERON:0001556;5.11e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,5.33e-18,10;UBERON:0000358,5.33e-18,10;UBERON:0000307,5.33e-18,10;UBERON:0000091,5.33e-18,10;UBERON:0000087,5.33e-18,10;UBERON:0007010,5.33e-18,10;UBERON:0007806,5.33e-18,10;UBERON:0008780,5.33e-18,10;UBERON:0005728,5.33e-18,10;UBERON:0004645,8.85e-13,1;UBERON:0001256,8.85e-13,1;UBERON:0001259,8.85e-13,1;UBERON:0000365,8.13e-10,5;UBERON:0005910,2.52e-08,6;UBERON:0000478,1.25e-07,24;UBERON:0000178,2.95e-07,15;UBERON:0000179,2.95e-07,15;UBERON:0000463,2.95e-07,15;UBERON:0001255,5.11e-07,2;UBERON:0001556,5.11e-07,2 | |||
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| ||
|short_description=p5@MAP3K4 | |||
}} | }} |
Latest revision as of 16:50, 16 September 2015
Short description: | p5@MAP3K4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MAP3K4_5end |
Coexpression cluster: | C4580_Saos2_oral_transitionalcell_splenic_cord_b_astrocytoma |
Association with transcript: | -434bp_to_ENST00000446500_5end |
EntrezGene: | MAP3K4 |
HGNC: | 6856 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 8.85e-13 | 1 |
lower urinary tract cell | 8.85e-13 | 1 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 5.33e-18 | 10 |
blastocyst | 5.33e-18 | 10 |
blastula | 5.33e-18 | 10 |
bilaminar disc | 5.33e-18 | 10 |
inner cell mass | 5.33e-18 | 10 |
cleaving embryo | 5.33e-18 | 10 |
connecting stalk | 5.33e-18 | 10 |
inner cell mass derived epiblast | 5.33e-18 | 10 |
extraembryonic mesoderm | 5.33e-18 | 10 |
urinary bladder urothelium | 8.85e-13 | 1 |
wall of urinary bladder | 8.85e-13 | 1 |
mucosa of urinary bladder | 8.85e-13 | 1 |
urothelium | 8.13e-10 | 5 |
transitional epithelium | 2.52e-08 | 6 |
extraembryonic structure | 1.25e-07 | 24 |
blood | 2.95e-07 | 15 |
haemolymphatic fluid | 2.95e-07 | 15 |
organism substance | 2.95e-07 | 15 |
urinary bladder | 5.11e-07 | 2 |
lower urinary tract | 5.11e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 3.85e-12 | 1 |
cutaneous T cell lymphoma | 3.85e-12 | 1 |
mycosis fungoides | 3.85e-12 | 1 |