FFCP PHASE1:Hg19::chr11:62186498..62186515,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=7356 | |EntrezGene=7356 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=12523 | |HGNC=12523 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=P11684 | |UniProt=P11684 | ||
|association_with_transcript=0bp_to_ENST00000278282,NM_003357_5end | |association_with_transcript=0bp_to_ENST00000278282,NM_003357_5end | ||
|cluster_id=chr11:62186498..62186515,+ | |||
|coexpression_cluster_id=C95 | |coexpression_cluster_id=C95 | ||
|description=CAGE_peak_1_at_SCGB1A1_5end | |description=CAGE_peak_1_at_SCGB1A1_5end | ||
Latest revision as of 18:53, 18 September 2015
| Short description: | p1@SCGB1A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_SCGB1A1_5end |
| Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
| Association with transcript: | 0bp_to_ENST00000278282, NM_003357_5end |
| EntrezGene: | SCGB1A1 |
| HGNC: | 12523 |
| UniProt: | P11684 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@SCGB1A1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neck | 2.47e-13 | 10 |
| pharynx | 6.74e-12 | 11 |
| open tracheal system trachea | 2.20e-09 | 2 |
| throat | 2.92e-09 | 2 |
| chordate pharynx | 3.30e-09 | 10 |
| pharyngeal region of foregut | 3.30e-09 | 10 |
| respiratory system | 3.66e-07 | 74 |
| adult organism | 7.34e-07 | 114 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| squamous cell carcinoma | 3.05e-12 | 14 |
Showing 1 to 1 of 1 entries
