FFCP PHASE1:Hg19::chr6:31913820..31913841,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr6:31913820..31913841,+
|short_description=p3@CFB
|description=CAGE_peak_3_at_CFB_5end
|association_with_transcript=-61bp_to_ENST00000460718_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=629 | |EntrezGene=629 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1037 | |HGNC=1037 | ||
|TSSclassifier=strong | |||
|UniProt=F8WBL9 | |UniProt=F8WBL9 | ||
|association_with_transcript=-61bp_to_ENST00000460718_5end | |||
|cluster_id=chr6:31913820..31913841,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CFB_5end | |||
|id=chr6:31913820..31913841,+ | |||
|ontology_enrichment_celltype=CL:0000077!8.54e-07!19 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.37e-08;12!CL:0000077;1.12e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.03e-08,12;CL:0000077,1.64e-07,19 | |||
|ontology_enrichment_development_v019=UBERON:0009497;2.51e-10;13!UBERON:0004161;1.28e-09;11!UBERON:0006595;3.90e-07;86 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000481!2.71e-13!347;UBERON:0001007!3.13e-11!155;UBERON:0001555!3.13e-11!155;UBERON:0007026!3.13e-11!155;UBERON:0000477!4.48e-11!286;UBERON:0000062!5.82e-11!511;UBERON:0009497!1.62e-10!25;UBERON:0000015!1.62e-10!25;UBERON:0002423!1.62e-10!25;UBERON:0006235!1.62e-10!25;UBERON:0004161!1.62e-10!25;UBERON:0004921!3.29e-10!129;UBERON:0004185!3.29e-10!129;UBERON:0004119!4.01e-10!169;UBERON:0000925!4.01e-10!169;UBERON:0006595!4.01e-10!169;UBERON:0009854!8.23e-10!23;UBERON:0003929!1.37e-09!54;UBERON:0007023!1.49e-09!115;UBERON:0001048!2.05e-09!168;UBERON:0000077!2.47e-09!130;UBERON:0008835!2.98e-09!22;UBERON:0003894!2.98e-09!22;UBERON:0002530!6.37e-09!59;UBERON:0009856!1.27e-08!26;UBERON:0000480!2.21e-08!626;UBERON:0000468!2.85e-08!659;UBERON:0000467!2.93e-08!625;UBERON:0002107!3.74e-08!19;UBERON:0006925!3.74e-08!19;UBERON:0008836!3.74e-08!19;UBERON:0007499!4.30e-08!25;UBERON:0002368!5.36e-08!35;UBERON:0001041!1.22e-07!98;UBERON:0002365!2.01e-07!31;UBERON:0002330!2.01e-07!31;UBERON:0000923!2.30e-07!604;UBERON:0005291!2.30e-07!604;UBERON:0006598!2.30e-07!604;UBERON:0002532!2.30e-07!604;UBERON:0002050!3.18e-07!605;UBERON:0005423!3.18e-07!605;UBERON:0003104!3.36e-07!238;UBERON:0009142!3.36e-07!238;UBERON:0004111!4.05e-07!241;UBERON:0000922!5.31e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0002423;9.51e-13;25!UBERON:0002107;3.20e-10;19!UBERON:0006925;3.20e-10;19!UBERON:0002368;1.14e-09;33!UBERON:0002365;2.12e-08;31!UBERON:0002330;2.12e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,1.90e-12,25;UBERON:0000015,1.90e-12,25;UBERON:0002423,1.90e-12,25;UBERON:0006235,1.90e-12,25;UBERON:0004161,1.90e-12,25;UBERON:0009854,2.92e-12,23;UBERON:0008835,1.80e-11,22;UBERON:0003894,1.80e-11,22;UBERON:0001007,6.92e-11,145;UBERON:0001555,6.92e-11,145;UBERON:0007026,6.92e-11,145;UBERON:0004921,4.30e-10,118;UBERON:0009856,4.33e-10,26;UBERON:0002107,6.75e-10,19;UBERON:0006925,6.75e-10,19;UBERON:0008836,6.75e-10,19;UBERON:0004119,7.79e-10,160;UBERON:0000925,7.79e-10,160;UBERON:0006595,7.79e-10,160;UBERON:0007499,2.30e-09,25;UBERON:0002368,7.46e-09,35;UBERON:0001041,1.58e-08,87;UBERON:0003929,2.69e-08,54;UBERON:0002365,3.06e-08,31;UBERON:0002330,3.06e-08,31;UBERON:0002530,1.65e-07,59;UBERON:0000949,2.18e-07,45 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,2.61701557230111,0,0.631719873426831,0.261185628199839,0.245733936501509,0,0,0,2.72285976512103,4.30816588446291,0,0,0,0,0.123121058076788,0,1.88072832886853,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,2.21598163412751,1.40381113229099,1.08505435357926,0,0,0,0,0,0,0,0,0.309706370895104,0.575384784644301,0.256160706529101,0.47296445977717,1.72372840368309,0,1.35426486594342,0,0,0,0.918251677112708,0.962787081228281,1.91801137739712,0.659702600373432,0.199463657621632,0,7.83564944297177,5.6738522469114,6.85104473895132,0,0.521482918420201,0,6.65939452896706,6.99727508376373,8.86094684834476,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.383587685530591,1.80719576192283,6.51739283826656,7.53201898596283,1.5905718941022,7.29952305453954,2.74150969775797,0.665188192387692,0.87834785693126,6.54895377488563,0.364295288292542,0.741568885568859,1.29818957461873,1.21890816109487,1.32957960518865,0,0,0,0,0.860234595106124,0,0,0,0,0,0.258416759169329,0,0,0,0,0.976248230192678,0,0,0.0892997282840798,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0.496971951695318,1.01304409331664,1.85372853138506,5.44989579422746,0.354668382198357,2.24271040056923,0,0.74000264525148,2.17847724779836,0.269421344139376,0,1.96764655938411,2.30470369792,0,0,0,0,0,0,0,0.204154171254893,0,1.23990937410919,8.31602000097437,2.71993622206413,0,0,0,0,0,0.877955241761676,0,6.15976041517047,0.567160915800105,0,0.213557388818567,1.90738711043606,0,0.309157587715317,1.03056216018252,0.18611685633159,0.506328996723799,0,0.504867548488229,0.276149695926898,2.42469085228218,0,0,0.169560592310488,0.57978255948989,0.272746120590835,0,0,0,0.232387885739037,0,0,0,0,2.57296375277154,0,0.928735856063958,0,2.01121560067735,0.505754070234305,1.44606617930089,2.09558548191549,1.74303555273925,2.13543557199987,1.21348177344148,1.76599318612811,1.92373578473195,0,0,1.2347220339942,2.94017422771084,39.2940607947676,28.5019892836512,30.1302852407516,0,5.78045661152634,1.20097467208968,0,0,0.100528972411631,0.462942225792648,0,0,1.44331342025273,1.97081688457631,0.939269553886573,1.15493158208859,0.925971025153221,1.71228737011138,0,0,2.46217006087397,1.63802985597466,1.18904929830983,0,0,0.425325291727159,0.716468181622786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.87192013766656,0,0.517086863031111,3.57656445851882,0,0.26593811658487,0,0,0,0,1.00084595560703,0,0.823240336780769,0.65147236858747,0.710783897485092,0,6.93310567237048,3.48613383440118,7.29802835629016,0,0,0,0.718874566474748,2.29723871668228,0,0.144781306667579,2.05476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85225547002495,2.50085260529839,1.89885516589815,4.15941723061614,1.24900292158013,0.788512075169673,10.5427273493442,1.20378439891088,0,2.0694614258501,0,0.368738337083406,1.21637060255316,0.195801157462741,0.343143423810856,0,0,0.106727557803444,0,0,0.30239029332968,0.496215615637554,0.306923946576125,0.561320188866147,1.15325234330131,0,0.160853921143607,0,0.308419387605311,0.532685175939381,0.9033987161519,0.519254429183621,0.232420756919918,3.50492403815704,0.40101294060657,0.0920809889358963,0.574072240823034,1.45672934405374,1.70461739447251,0,0,0,0,0.422206515571503,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.256450125116389,1.64007322849853,0.650756789328606,16.2804798403401,0,0,0.574265537996172,0.650060246036521,0,0.676695028044854,0.154048617114644,0.460511024178389,0,1.18162269355101,0.145016693914229,0.340906509664404,1.33548053470106,0,0.192190067365106,0.127612712494584,0.4046311234222,0,1.5740617341532,0,7.08477234405004,0.532306030317022,1.73986598415015,0,0.715624433709956,0,1.58189712359363,0.762520775695299,0.255897791311334,1.71175595213568,0.95460974377781,1.56989728039846,0.539617372749944,0,0,0.202182481573316,0,0,0,11.2108205230391,2.11300293513511,0.682499557039929,0.565621727814851,3.39024349860728,1.65409603063837,3.3171948762061,3.06915619677634,0.578775534266688,4.59126326432643,0.202910376962704,0.6196469961995,0,0,0.392996164052485,0,0,16.8886108238131,18.4405140057545,0,0,0.0962221127255121,0,0,19.1111915576862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55567026775618,2.3441308683503,0,0.111443384277478,0,0.47748896947538,0.296964680832639,0,0,0.562677665642051,0.556543525114529,0.16480387422676,0,2.39097585901284,4.42054264849836,0,0,0,0,1.52776196950456,1.61119057208048,0,1.38100767891707,0,0,0,0.927680981618513,0,0,0,2.17499872630438,0,0.254253650292766,0,0,0,0.173624994933292,0,0.60298219312704,0,0.221158519862449,0,0.87754158861589,1.0893846351899,0.139423744278603,1.15425387755696,6.15287101573807,0,0,0,0.957003479195758,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,0,1.30586246527318,1.83758992864123,0,0.995261931078505,7.96118080530053,0,0,0,0,1.07841812769083,0,0.702793337176017,0,0.782658475728359,0,3.94584402849391,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| ||
|short_description=p3@CFB | |||
}} | }} |
Latest revision as of 01:01, 18 September 2015
Short description: | p3@CFB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CFB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -61bp_to_ENST00000460718_5end |
EntrezGene: | CFB |
HGNC: | 1037 |
UniProt: | F8WBL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.03e-08 | 12 |
mesothelial cell | 1.64e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 1.90e-12 | 25 |
anatomical boundary | 1.90e-12 | 25 |
hepatobiliary system | 1.90e-12 | 25 |
foregut-midgut junction | 1.90e-12 | 25 |
septum transversum | 1.90e-12 | 25 |
digestive tract diverticulum | 2.92e-12 | 23 |
hepatic diverticulum | 1.80e-11 | 22 |
liver primordium | 1.80e-11 | 22 |
digestive system | 6.92e-11 | 145 |
digestive tract | 6.92e-11 | 145 |
primitive gut | 6.92e-11 | 145 |
subdivision of digestive tract | 4.30e-10 | 118 |
sac | 4.33e-10 | 26 |
liver | 6.75e-10 | 19 |
digestive gland | 6.75e-10 | 19 |
liver bud | 6.75e-10 | 19 |
endoderm-derived structure | 7.79e-10 | 160 |
endoderm | 7.79e-10 | 160 |
presumptive endoderm | 7.79e-10 | 160 |
epithelial sac | 2.30e-09 | 25 |
endocrine gland | 7.46e-09 | 35 |
foregut | 1.58e-08 | 87 |
gut epithelium | 2.69e-08 | 54 |
exocrine gland | 3.06e-08 | 31 |
exocrine system | 3.06e-08 | 31 |
gland | 1.65e-07 | 59 |
endocrine system | 2.18e-07 | 45 |