FFCP PHASE1:Hg19::chr16:4588423..4588453,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=29965 | |EntrezGene=29965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=13234 | |HGNC=13234 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9H305 | |UniProt=Q9H305 | ||
|association_with_transcript=17bp_to_NM_001199054,uc002cwv.2_5end | |association_with_transcript=17bp_to_NM_001199054,uc002cwv.2_5end | ||
|cluster_id=chr16:4588423..4588453,- | |||
|description=CAGE_peak_2_at_C16orf5_5end | |description=CAGE_peak_2_at_C16orf5_5end | ||
|id=chr16:4588423..4588453,- | |id=chr16:4588423..4588453,- | ||
Latest revision as of 16:57, 16 September 2015
| Short description: | p2@C16orf5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_C16orf5_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 17bp_to_NM_001199054, uc002cwv.2_5end |
| EntrezGene: | C16orf5 |
| HGNC: | 13234 |
| UniProt: | Q9H305 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@C16orf5 |
|---|
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35
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| neural cell | 6.41e-08 | 25 |
| neurectodermal cell | 1.41e-07 | 59 |
| ectodermal cell | 7.99e-07 | 72 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 2.71e-41 | 89 |
| central nervous system | 1.67e-39 | 81 |
| neurectoderm | 1.33e-34 | 86 |
| ectoderm-derived structure | 2.30e-34 | 171 |
| ectoderm | 2.30e-34 | 171 |
| presumptive ectoderm | 2.30e-34 | 171 |
| neural plate | 2.38e-34 | 82 |
| presumptive neural plate | 2.38e-34 | 82 |
| neural tube | 1.02e-33 | 56 |
| neural rod | 1.02e-33 | 56 |
Showing 1 to 10 of 59 entries
