FFCP PHASE1:Hg19::chr6:50786631..50786635,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:50786631..50786635,+
|short_description=p11@TFAP2B
|description=CAGE_peak_11_at_TFAP2B_5end
|association_with_transcript=195bp_to_ENST00000344788_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7021 | |EntrezGene=7021 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11743 | |HGNC=11743 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=195bp_to_ENST00000344788_5end | |||
|cluster_id=chr6:50786631..50786635,+ | |||
|coexpression_cluster_id=C2863 | |||
|description=CAGE_peak_11_at_TFAP2B_5end | |||
|id=chr6:50786631..50786635,+ | |||
|ontology_enrichment_celltype=CL:0002322!2.76e-12!5;CL:0000242!2.55e-09!2;CL:0002367!3.00e-09!2;CL:0002077!7.98e-08!33;CL:0000312!1.12e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000123;2.38e-29;2!CL:0000242;2.38e-29;2!CL:0002367;3.41e-29;2!CL:0002550;1.34e-15;1!CL:0000222;2.56e-15;1!CL:0000333;1.19e-12;5!CL:0000312;2.31e-12;5!CL:0000240;1.85e-10;6!CL:0000311;1.85e-10;6!CL:0000079;1.85e-10;6!CL:0000237;1.85e-10;6!CL:0002321;3.08e-09;15!CL:0000362;2.90e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.66e-29,2;CL:0002367,2.96e-29,2;CL:0002550,1.34e-15,1;CL:0000312,2.00e-12,5;CL:0000240,1.65e-10,6;CL:0000311,1.65e-10,6;CL:0000079,1.65e-10,6;CL:0000237,1.65e-10,6;CL:0000036,1.65e-10,6;CL:0000357,1.65e-10,6;CL:0000114,1.65e-10,6;CL:0000362,2.68e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.87e-20;3!UBERON:0008425;8.63e-16;1!CL:0000357;1.85e-10;6!CL:0000114;1.85e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:171;1.24e-13;10!DOID:169;1.07e-10;6!DOID:3193;1.20e-08;2!DOID:962;1.20e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.24e-13,10;DOID:169,1.07e-10,6;DOID:3193,1.20e-08,2;DOID:962,1.20e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002680!2.52e-14!9;UBERON:0001895!2.52e-14!9;UBERON:0010092!2.52e-14!9;UBERON:0004733!4.41e-14!12;UBERON:0002028!4.41e-14!12;UBERON:0007277!4.41e-14!12;UBERON:0004732!6.33e-13!13;UBERON:0000988!4.36e-11!3;UBERON:0003076!4.49e-11!15;UBERON:0003057!4.49e-11!15;UBERON:0001044!2.12e-10!6;UBERON:0003293!2.12e-10!6;UBERON:0003294!2.12e-10!6;UBERON:0010047!2.12e-10!6;UBERON:0000167!2.12e-10!6;UBERON:0005969!3.00e-09!2;UBERON:0003956!3.00e-09!2;UBERON:0001829!8.00e-09!2;UBERON:0000924!2.39e-08!173;UBERON:0006601!2.39e-08!173;UBERON:0002148!5.26e-08!2;UBERON:0009662!5.26e-08!2;UBERON:0004121!8.83e-08!169;UBERON:0001444!2.31e-07!48;UBERON:0002298!4.05e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;3.41e-29;2!UBERON:0003956;3.41e-29;2!UBERON:0000013;1.19e-12;5!UBERON:0002410;1.19e-12;5!UBERON:0002037;2.09e-10;6!UBERON:0002203;2.09e-10;6!UBERON:0001768;2.09e-10;6!UBERON:0002200;2.09e-10;6!UBERON:0003714;1.20e-08;2!UBERON:0000010;2.02e-07;8!UBERON:0002680;3.14e-07;9!UBERON:0001895;3.14e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,2.96e-29,2;UBERON:0003956,2.96e-29,2;UBERON:0000013,1.19e-12,5;UBERON:0002410,1.19e-12,5;UBERON:0002203,1.99e-10,6;UBERON:0001768,1.99e-10,6;UBERON:0002200,1.99e-10,6;UBERON:0002037,2.29e-10,6;UBERON:0006215,2.29e-10,6;UBERON:0003714,1.20e-08,2;UBERON:0000010,2.02e-07,8;UBERON:0002680,3.34e-07,9;UBERON:0001895,3.34e-07,9;UBERON:0010092,3.34e-07,9;UBERON:0004121,3.80e-07,171;UBERON:0000924,3.80e-07,171;UBERON:0006601,3.80e-07,171 | |||
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| ||
|short_description=p11@TFAP2B | |||
}} | }} |
Latest revision as of 05:27, 19 September 2015
Short description: | p11@TFAP2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TFAP2B_5end |
Coexpression cluster: | C2863_neuroepithelioma_breast_neuroblastoma_merkel_epididymis_neuroectodermal_Trabecular |
Association with transcript: | 195bp_to_ENST00000344788_5end |
EntrezGene: | TFAP2B |
HGNC: | 11743 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.66e-29 | 2 |
trabecular meshwork cell | 2.96e-29 | 2 |
fibroblast of the conjuctiva | 1.34e-15 | 1 |
keratinocyte | 2.00e-12 | 5 |
stratified squamous epithelial cell | 1.65e-10 | 6 |
keratin accumulating cell | 1.65e-10 | 6 |
stratified epithelial cell | 1.65e-10 | 6 |
keratinizing barrier epithelial cell | 1.65e-10 | 6 |
epithelial fate stem cell | 1.65e-10 | 6 |
stratified epithelial stem cell | 1.65e-10 | 6 |
surface ectodermal cell | 1.65e-10 | 6 |
epidermal cell | 2.68e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
reticulum trabeculare | 2.96e-29 | 2 |
aqueous drainage system | 2.96e-29 | 2 |
sympathetic nervous system | 1.19e-12 | 5 |
autonomic nervous system | 1.19e-12 | 5 |
vasculature of eye | 1.99e-10 | 6 |
uvea | 1.99e-10 | 6 |
vasculature of head | 1.99e-10 | 6 |
cerebellum | 2.29e-10 | 6 |
rhombic lip | 2.29e-10 | 6 |
neural tissue | 1.20e-08 | 2 |
peripheral nervous system | 2.02e-07 | 8 |
regional part of metencephalon | 3.34e-07 | 9 |
metencephalon | 3.34e-07 | 9 |
future metencephalon | 3.34e-07 | 9 |
ectoderm-derived structure | 3.80e-07 | 171 |
ectoderm | 3.80e-07 | 171 |
presumptive ectoderm | 3.80e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.24e-13 | 10 |
neuroendocrine tumor | 1.07e-10 | 6 |
peripheral nerve sheath neoplasm | 1.20e-08 | 2 |
neurofibroma | 1.20e-08 | 2 |