FFCP PHASE1:Hg19::chr6:73935150..73935162,-: Difference between revisions
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|id=chr6:73935150..73935162,-
|short_description=p3@KHDC1L
|description=CAGE_peak_3_at_KHDC1L_5end
|association_with_transcript=12bp_to_ENST00000370388,NM_001126063...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=100129128 | |EntrezGene=100129128 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=37274 | |HGNC=37274 | ||
|TSSclassifier=strong | |||
|UniProt=Q5JSQ8 | |UniProt=Q5JSQ8 | ||
|association_with_transcript=12bp_to_ENST00000370388,NM_001126063,uc003pgm.3_5end | |||
|cluster_id=chr6:73935150..73935162,- | |||
|coexpression_cluster_id=C196 | |||
|description=CAGE_peak_3_at_KHDC1L_5end | |||
|id=chr6:73935150..73935162,- | |||
|ontology_enrichment_celltype=CL:0000039!1.05e-64!7;CL:0000586!1.05e-64!7;CL:1000415!2.07e-10!2;CL:0002541!2.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000039;3.15e-112;7!CL:0000586;3.15e-112;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,3.15e-112,7;CL:0000586,3.15e-112,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;4.18e-45;10!UBERON:0005564;4.18e-45;10 | |||
|ontology_enrichment_disease=DOID:3095!8.62e-21!22;DOID:2994!8.62e-21!22;DOID:1799!2.25e-19!1;DOID:10165!2.25e-19!1;DOID:1798!2.25e-19!1 | |||
|ontology_enrichment_disease_v019=DOID:3095;1.49e-36;22!DOID:2994;1.49e-36;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.49e-36,22;DOID:2994,1.49e-36,22 | |||
|ontology_enrichment_uberon=UBERON:0000473!1.36e-36!8;UBERON:0003135!9.24e-27!11;UBERON:0000991!3.16e-14!21;UBERON:0009196!3.16e-14!21;UBERON:0009117!3.16e-14!21;UBERON:0005564!3.16e-14!21;UBERON:0002323!4.32e-14!46;UBERON:0004176!1.35e-13!22;UBERON:0003101!1.35e-13!22;UBERON:0000079!1.35e-13!22;UBERON:0004458!3.20e-13!49;UBERON:0003886!2.98e-10!63;UBERON:0002553!3.29e-09!70;UBERON:0002110!2.32e-07!3;UBERON:0006242!2.32e-07!3;UBERON:0000476!2.63e-07!3;UBERON:0000920!2.63e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;4.57e-56;8!UBERON:0003135;4.07e-41;11!UBERON:0000991;4.43e-22;21!UBERON:0003101;3.99e-21;22!UBERON:0000079;3.99e-21;22!UBERON:0003133;3.92e-09;44!UBERON:0002323;3.95e-09;45!UBERON:0000922;1.88e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.57e-56,8;UBERON:0003135,4.07e-41,11;UBERON:0000991,4.43e-22,21;UBERON:0009196,4.43e-22,21;UBERON:0009117,4.43e-22,21;UBERON:0005564,4.43e-22,21;UBERON:0004176,3.99e-21,22;UBERON:0003101,3.99e-21,22;UBERON:0000079,3.99e-21,22;UBERON:0002323,1.31e-10,46;UBERON:0003133,3.32e-10,48;UBERON:0004458,5.14e-10,49;UBERON:0003886,3.61e-09,54;UBERON:0005156,1.83e-08,59;UBERON:0000990,1.83e-08,59;UBERON:0002553,3.25e-08,61 | |||
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|short_description=p3@KHDC1L | |||
}} | }} |
Latest revision as of 17:42, 19 September 2015
Short description: | p3@KHDC1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KHDC1L_5end |
Coexpression cluster: | C196_testicular_iPS_H9_teratocarcinoma_HES3GFP_choriocarcinoma_endometrial |
Association with transcript: | 12bp_to_ENST00000370388, NM_001126063, uc003pgm.3_5end |
EntrezGene: | KHDC1L |
HGNC: | 37274 |
UniProt: | Q5JSQ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 3.15e-112 | 7 |
germ cell | 3.15e-112 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 4.57e-56 | 8 |
male reproductive organ | 4.07e-41 | 11 |
gonad | 4.43e-22 | 21 |
indifferent external genitalia | 4.43e-22 | 21 |
indifferent gonad | 4.43e-22 | 21 |
gonad primordium | 4.43e-22 | 21 |
external genitalia | 3.99e-21 | 22 |
male organism | 3.99e-21 | 22 |
male reproductive system | 3.99e-21 | 22 |
body cavity | 1.31e-10 | 46 |
reproductive organ | 3.32e-10 | 48 |
body cavity or lining | 5.14e-10 | 49 |
body cavity precursor | 3.61e-09 | 54 |
reproductive structure | 1.83e-08 | 59 |
reproductive system | 1.83e-08 | 59 |
anatomical cavity | 3.25e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.49e-36 | 22 |
germ cell cancer | 1.49e-36 | 22 |