FFCP PHASE1:Hg19::chr3:42055402..42055419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=22906 | |EntrezGene=22906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=29947 | |HGNC=29947 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=108bp_to_ENST00000487159_5end | |association_with_transcript=108bp_to_ENST00000487159_5end | ||
|cluster_id=chr3:42055402..42055419,+ | |||
|description=CAGE_peak_9_at_TRAK1_5end | |description=CAGE_peak_9_at_TRAK1_5end | ||
|id=chr3:42055402..42055419,+ | |id=chr3:42055402..42055419,+ | ||
Latest revision as of 05:41, 18 September 2015
| Short description: | p9@TRAK1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_9_at_TRAK1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 108bp_to_ENST00000487159_5end |
| EntrezGene: | TRAK1 |
| HGNC: | 29947 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p9@TRAK1 |
|---|
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5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| chorionic membrane mesenchymal stem cell | 7.29e-14 | 3 |
| extraembryonic cell | 1.29e-12 | 19 |
| amnion mesenchymal stem cell | 8.34e-08 | 5 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 9.85e-18 | 14 |
| membranous layer | 9.85e-18 | 14 |
| egg chorion | 7.29e-14 | 3 |
| extraembryonic structure | 2.85e-12 | 24 |
| chorion | 4.68e-10 | 7 |
| amnion | 2.53e-09 | 7 |
| somatic layer of lateral plate mesoderm | 3.66e-08 | 8 |
| organ component layer | 1.14e-07 | 66 |
Showing 1 to 8 of 8 entries
