FFCP PHASE1:Hg19::chr4:39046399..39046478,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=51088 | |EntrezGene=51088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=6356 | |HGNC=6356 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=F5H2H4,G3XA92,Q7Z6D5,E9PCF4,Q59HD9 | |UniProt=F5H2H4,G3XA92,Q7Z6D5,E9PCF4,Q59HD9 | ||
|association_with_transcript=0bp_to_ENST00000544221,NM_001007075,NM_001171654_5end | |association_with_transcript=0bp_to_ENST00000544221,NM_001007075,NM_001171654_5end | ||
|cluster_id=chr4:39046399..39046478,+ | |||
|description=CAGE_peak_1_at_KLHL5_5end | |description=CAGE_peak_1_at_KLHL5_5end | ||
|id=chr4:39046399..39046478,+ | |id=chr4:39046399..39046478,+ | ||
Latest revision as of 16:34, 17 September 2015
| Short description: | p1@KLHL5 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_KLHL5_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_ENST00000544221, NM_001007075, NM_001171654_5end |
| EntrezGene: | KLHL5 |
| HGNC: | 6356 |
| UniProt: | F5H2H4G3XA92Q7Z6D5E9PCF4Q59HD9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@KLHL5 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.59e-18 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.59e-18 | 42 |
| defensive cell | 6.83e-17 | 48 |
| phagocyte | 6.83e-17 | 48 |
| macrophage dendritic cell progenitor | 1.37e-13 | 61 |
| monopoietic cell | 7.68e-13 | 59 |
| monocyte | 7.68e-13 | 59 |
| monoblast | 7.68e-13 | 59 |
| promonocyte | 7.68e-13 | 59 |
| myeloid leukocyte | 5.51e-11 | 72 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| skeletal system | 1.08e-10 | 100 |
| skeletal element | 1.22e-10 | 90 |
| immune system | 2.40e-09 | 93 |
| bone element | 4.08e-09 | 82 |
| hemolymphoid system | 4.57e-09 | 108 |
| bone marrow | 4.63e-09 | 76 |
| hematopoietic system | 6.41e-08 | 98 |
| blood island | 6.41e-08 | 98 |
| musculoskeletal system | 2.32e-07 | 167 |
Showing 1 to 9 of 9 entries
