FFCP PHASE1:Hg19::chr5:152870189..152870200,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=2890 | |EntrezGene=2890 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=4571 | |HGNC=4571 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-3bp_to_ENST00000474198_5end | |association_with_transcript=-3bp_to_ENST00000474198_5end | ||
|cluster_id=chr5:152870189..152870200,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_5_at_GRIA1_5end | |description=CAGE_peak_5_at_GRIA1_5end | ||
Latest revision as of 11:26, 16 September 2015
| Short description: | p5@GRIA1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_5_at_GRIA1_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | -3bp_to_ENST00000474198_5end |
| EntrezGene: | GRIA1 |
| HGNC: | 4571 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p5@GRIA1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| cerebral hemisphere | 2.21e-94 | 32 |
| telencephalon | 1.35e-88 | 34 |
| brain grey matter | 2.24e-88 | 34 |
| gray matter | 2.24e-88 | 34 |
| regional part of telencephalon | 1.20e-87 | 32 |
| regional part of forebrain | 1.55e-83 | 41 |
| forebrain | 1.55e-83 | 41 |
| anterior neural tube | 1.55e-83 | 41 |
| future forebrain | 1.55e-83 | 41 |
| regional part of nervous system | 1.60e-82 | 53 |
Showing 1 to 10 of 72 entries
