FFCP PHASE1:Hg19::chr7:23719840..23719854,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=340277 | |EntrezGene=340277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=27977 | |HGNC=27977 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=42bp_to_ENST00000462546_5end | |association_with_transcript=42bp_to_ENST00000462546_5end | ||
|cluster_id=chr7:23719840..23719854,+ | |||
|coexpression_cluster_id=C41 | |coexpression_cluster_id=C41 | ||
|description=CAGE_peak_2_at_C7orf46_5end | |description=CAGE_peak_2_at_C7orf46_5end | ||
Latest revision as of 21:13, 17 September 2015
| Short description: | p2@C7orf46 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_C7orf46_5end |
| Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
| Association with transcript: | 42bp_to_ENST00000462546_5end |
| EntrezGene: | C7orf46 |
| HGNC: | 27977 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p2@C7orf46 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| spinal cord | 2.30e-30 | 3 |
| dorsal region element | 2.30e-30 | 3 |
| dorsum | 2.30e-30 | 3 |
| posterior neural tube | 6.44e-14 | 15 |
| chordal neural plate | 6.44e-14 | 15 |
| dorsal plus ventral thalamus | 1.65e-12 | 2 |
| thalamic complex | 1.65e-12 | 2 |
| globus pallidus | 2.07e-12 | 2 |
| pallidum | 2.07e-12 | 2 |
| neural tube | 6.82e-10 | 56 |
Showing 1 to 10 of 20 entries
