FFCP PHASE1:Hg19::chr8:11403548..11403584,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:11403548..11403584,+
|short_description=p3@BLK
|description=CAGE_peak_3_at_BLK_5end
|association_with_transcript=308bp_to_ENST00000533828_5end
|EntrezGene...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=640 | |EntrezGene=640 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1057 | |HGNC=1057 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=308bp_to_ENST00000533828_5end | |||
|cluster_id=chr8:11403548..11403584,+ | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_BLK_5end | |||
|id=chr8:11403548..11403584,+ | |||
|ontology_enrichment_celltype=CL:0000945!4.12e-41!24;CL:0000826!4.12e-41!24;CL:0000236!5.23e-28!14;CL:0000542!4.12e-24!53;CL:0000051!4.12e-24!53;CL:0000838!7.79e-23!52;CL:0002087!1.21e-14!119;CL:0000738!4.16e-14!140;CL:0000988!1.83e-11!182;CL:0000037!9.57e-11!172;CL:0000566!9.57e-11!172;CL:0002031!4.35e-10!124;CL:0002032!1.73e-09!165;CL:0000837!1.73e-09!165;CL:0000080!1.37e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000945;5.62e-61;24!CL:0000236;5.82e-43;13!CL:0000542;7.99e-19;53!CL:0002554;6.31e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.88e-61,24;CL:0000826,4.88e-61,24;CL:0000236,3.28e-46,14;CL:0000542,3.84e-30,53;CL:0000051,3.84e-30,53;CL:0000838,5.03e-28,52;CL:0002087,1.68e-14,115;CL:0000738,1.83e-12,136;CL:0002031,4.07e-10,120;CL:0000037,6.41e-10,168;CL:0000988,4.21e-09,177;CL:0002032,9.49e-09,161;CL:0000837,9.49e-09,161;CL:0000785,3.38e-08,2;CL:0000955,3.38e-08,2;CL:0000818,3.38e-08,2;CL:0000954,3.38e-08,2;CL:0000816,3.38e-08,2;CL:0002554,4.89e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000051;7.99e-19;53!UBERON:0004872;2.90e-09;7!CL:0000954;3.02e-08;2 | |||
|ontology_enrichment_disease=DOID:0060058!1.14e-08!10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.03e-23!15;UBERON:0000179!3.03e-23!15;UBERON:0000463!3.03e-23!15;UBERON:0007023!6.10e-11!115;UBERON:0002193!8.45e-08!112;UBERON:0002106!3.06e-07!3;UBERON:0004854!3.06e-07!3;UBERON:0009034!3.06e-07!3;UBERON:0002095!3.06e-07!3;UBERON:0004782!3.06e-07!3;UBERON:0003281!3.06e-07!3;UBERON:0009664!3.06e-07!3;UBERON:0002296!3.06e-07!3;UBERON:0005602!3.06e-07!3;UBERON:0001179!3.06e-07!3;UBERON:0006293!3.06e-07!3;UBERON:0004177!4.12e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.79e-28;15!UBERON:0000179;3.79e-28;15!UBERON:0000463;3.79e-28;15!UBERON:0002390;7.48e-19;32!UBERON:0002193;3.80e-18;42!UBERON:0002106;1.50e-12;3!UBERON:0001829;6.31e-08;2!UBERON:0004177;1.09e-07;5!UBERON:0005057;1.09e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,4.29e-28,15;UBERON:0000179,4.29e-28,15;UBERON:0000463,4.29e-28,15;UBERON:0002106,1.56e-12,3;UBERON:0004854,1.56e-12,3;UBERON:0009034,1.56e-12,3;UBERON:0002095,1.56e-12,3;UBERON:0004782,1.56e-12,3;UBERON:0003281,1.56e-12,3;UBERON:0009664,1.56e-12,3;UBERON:0002296,1.56e-12,3;UBERON:0005602,1.56e-12,3;UBERON:0001179,1.56e-12,3;UBERON:0006293,1.56e-12,3;UBERON:0002193,6.82e-08,108;UBERON:0001829,7.04e-08,2;UBERON:0007023,2.39e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.95361992306356,5.7470412614962,5.74588703589859,0,0.383829398097213,0.309632246632152,0,0,0,0.46480320348181,3.12772311472327,0,0,0,0,0,0.647787332037959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0.199463657621632,0,0,0,0.622822248995575,0,0,0,1.21079900526674,0.368277635987565,0,0,0,0,0,0,0,0,0,0,75.6783851183688,68.8134650190286,74.7187773245386,48.6472453725818,86.0851372127427,60.3490061952207,56.1888141867133,49.6107952358389,56.3520839418354,36.4087057409982,56.1941645344086,2.64342657158052,1.68152568894461,0,0,0,0.205601498999509,0,0,0.473447805734733,0,0,0,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82032272387605,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0.195801157462741,0,3.72182447021197,1.07857100409308,0.960548020230999,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0.413509717453592,0.107420244868274,0,0.340906509664404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.56702848308952,3.0585488285695,5.69647187174163,8.81457569193819,10.6954191002411,5.83625980073446,4.86028293514303,5.55187623405989,0,0,0,1.48642540100575,0.432807638929335,0,0,0,0,0,0,0,21.4540598291201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.52567831062295,0,0,5.78498585667027,0,0,0,0,1.08507746200627,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,2.98578579323551,0.442287822516696,0,0,0.247127877893006,0.313265848516366,0.067401132980677,0,0,2.18945747058799,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,2.90967049465258,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,16.3734787197944,0,3.16660755790329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0,0,0.265729680626726,0,0,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,1.09651553371436,0,0,0,0,0,0,0,0.0887023701626388,2.30467975111558,0,0,0,0,0,0.235479278551542,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0,0,0,0,0,0,0,0,10.0562792238443,6.5102466853313,14.091702985415,0,0,0,0,1.37618785021362,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0,0,0,0.639701945702943,0,0.387533459016037,0.682821857254437,0,0.190941474834495,0,0,0,12.1233695426258,0.932388670104793,0,0,0,0,0,0,0,0,0,12.0764276154616,1.60284246151616 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| ||
|short_description=p3@BLK | |||
}} | }} |
Latest revision as of 05:22, 25 September 2015
Short description: | p3@BLK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_BLK_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | 308bp_to_ENST00000533828_5end |
EntrezGene: | BLK |
HGNC: | 1057 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.88e-61 | 24 |
pro-B cell | 4.88e-61 | 24 |
B cell | 3.28e-46 | 14 |
lymphocyte | 3.84e-30 | 53 |
common lymphoid progenitor | 3.84e-30 | 53 |
lymphoid lineage restricted progenitor cell | 5.03e-28 | 52 |
nongranular leukocyte | 1.68e-14 | 115 |
leukocyte | 1.83e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 4.07e-10 | 120 |
hematopoietic stem cell | 6.41e-10 | 168 |
hematopoietic cell | 4.21e-09 | 177 |
hematopoietic oligopotent progenitor cell | 9.49e-09 | 161 |
hematopoietic multipotent progenitor cell | 9.49e-09 | 161 |
mature B cell | 3.38e-08 | 2 |
pre-B-II cell | 3.38e-08 | 2 |
transitional stage B cell | 3.38e-08 | 2 |
small pre-B-II cell | 3.38e-08 | 2 |
immature B cell | 3.38e-08 | 2 |
fibroblast of lymphatic vessel | 4.89e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 4.29e-28 | 15 |
haemolymphatic fluid | 4.29e-28 | 15 |
organism substance | 4.29e-28 | 15 |
spleen | 1.56e-12 | 3 |
gastrointestinal system mesentery | 1.56e-12 | 3 |
stomach region | 1.56e-12 | 3 |
mesentery | 1.56e-12 | 3 |
gastrointestinal system serosa | 1.56e-12 | 3 |
mesentery of stomach | 1.56e-12 | 3 |
gut mesentery | 1.56e-12 | 3 |
dorsal mesentery | 1.56e-12 | 3 |
dorsal mesogastrium | 1.56e-12 | 3 |
peritoneal cavity | 1.56e-12 | 3 |
spleen primordium | 1.56e-12 | 3 |
hemolymphoid system | 6.82e-08 | 108 |
major salivary gland | 7.04e-08 | 2 |
adult organism | 2.39e-07 | 114 |