FFCP PHASE1:Hg19::chr8:119905454..119905469,-: Difference between revisions
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|id=chr8:119905454..119905469,-
|short_description=p@chr8:119905454..119905469,-
|description=CAGE_peak_at_chr8:119905454..119905469,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:119905454..119905469,- | |||
|coexpression_cluster_id=C510 | |||
|description=CAGE_peak_at_chr8:119905454..119905469,- | |||
|id=chr8:119905454..119905469,- | |||
|ontology_enrichment_celltype=CL:0002620!2.10e-12!23;CL:0000057!5.92e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000222;5.71e-13;1!CL:0002537;2.19e-10;5!CL:0002552;4.12e-10;5!CL:0000054;2.15e-07;2!CL:0000137;2.15e-07;2!CL:0000092;2.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,2.25e-10,5;CL:0002552,3.59e-10,5;CL:0000054,2.15e-07,2;CL:0000137,2.15e-07,2;CL:0000092,2.15e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1192!1.15e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060085;1.61e-13;1!DOID:3165;1.61e-13;1!DOID:0060121;1.61e-13;1!DOID:2438;1.61e-13;1!DOID:4418;1.61e-13;1!DOID:3369;2.62e-13;1!DOID:200;2.15e-07;2!DOID:4305;2.15e-07;2!DOID:3307;3.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,1.61e-13,1;DOID:3165,1.61e-13,1;DOID:0060121,1.61e-13,1;DOID:2438,1.61e-13,1;DOID:4418,1.61e-13,1;DOID:3369,2.62e-13,1;DOID:200,2.15e-07,2;DOID:4305,2.15e-07,2;DOID:3307,3.28e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001905!6.05e-11!2;UBERON:0002757!6.05e-11!2;UBERON:0010134!6.05e-11!2;UBERON:0002784!6.05e-11!2;UBERON:0005408!6.05e-11!2;UBERON:0001899!6.05e-11!2;UBERON:0002097!1.98e-08!40;UBERON:0002199!2.54e-07!45;UBERON:0002416!2.54e-07!45;UBERON:0003102!4.31e-07!95 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;8.56e-24;2!UBERON:0002757;8.56e-24;2!UBERON:0010134;8.56e-24;2!UBERON:0005408;8.56e-24;2!UBERON:0001899;8.56e-24;2!UBERON:0003296;2.09e-12;4!UBERON:0010133;2.09e-12;4!UBERON:0002784;2.09e-12;4!UBERON:0005631;2.74e-11;10!UBERON:0000158;2.74e-11;10!UBERON:0000305;1.15e-07;7!UBERON:0001894;1.80e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,9.63e-24,2;UBERON:0002757,9.63e-24,2;UBERON:0010134,9.63e-24,2;UBERON:0005408,9.63e-24,2;UBERON:0001899,9.63e-24,2;UBERON:0003296,2.21e-12,4;UBERON:0010133,2.21e-12,4;UBERON:0002784,2.21e-12,4;UBERON:0005631,3.34e-08,14;UBERON:0000158,3.34e-08,14;UBERON:0000305,1.17e-07,7;UBERON:0001894,1.86e-07,7;UBERON:0006222,1.86e-07,7;UBERON:0004871,8.35e-07,8 | |||
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|short_description=p@chr8:119905454..119905469,- | |||
}} | }} |
Latest revision as of 14:22, 31 July 2015
Short description: | p@chr8:119905454..119905469, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:119905454..119905469, - |
Coexpression cluster: | C510_fibrous_mesothelioma_cholangiocellular_liposarcoma_Fibroblast_mesenchymal_leukemia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 2.25e-10 | 5 |
fibroblast of gingiva | 3.59e-10 | 5 |
bone matrix secreting cell | 2.15e-07 | 2 |
osteocyte | 2.15e-07 | 2 |
osteoclast | 2.15e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
pineal body | 9.63e-24 | 2 |
regional part of epithalamus | 9.63e-24 | 2 |
secretory circumventricular organ | 9.63e-24 | 2 |
circumventricular organ | 9.63e-24 | 2 |
epithalamus | 9.63e-24 | 2 |
gland of diencephalon | 2.21e-12 | 4 |
neuroendocrine gland | 2.21e-12 | 4 |
regional part of diencephalon | 2.21e-12 | 4 |
extraembryonic membrane | 3.34e-08 | 14 |
membranous layer | 3.34e-08 | 14 |
amnion | 1.17e-07 | 7 |
diencephalon | 1.86e-07 | 7 |
future diencephalon | 1.86e-07 | 7 |
somatic layer of lateral plate mesoderm | 8.35e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 1.61e-13 | 1 |
skin benign neoplasm | 1.61e-13 | 1 |
integumentary system benign neoplasm | 1.61e-13 | 1 |
dermis tumor | 1.61e-13 | 1 |
cutaneous fibrous histiocytoma | 1.61e-13 | 1 |
peripheral primitive neuroectodermal tumor | 2.62e-13 | 1 |
giant cell tumor | 2.15e-07 | 2 |
bone giant cell tumor | 2.15e-07 | 2 |
teratoma | 3.28e-07 | 2 |