FFCP PHASE1:Hg19::chr11:2160468..2160486,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3481 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5466 | |||
|TSSclassifier=strong | |||
|UniProt=P01344 | |||
|association_with_transcript=132bp_to_ENST00000416167_5end | |||
|cluster_id=chr11:2160468..2160486,- | |||
|coexpression_cluster_id=C172 | |||
|description=CAGE_peak_35_at_IGF2_5end | |||
|id=chr11:2160468..2160486,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.97e-20;19!CL:0002537;1.02e-09;5!CL:0002541;6.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.21e-20,19;CL:0002537,1.86e-09,5;CL:0002541,5.62e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003104;3.52e-07;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!2.01e-14!14;UBERON:0000158!2.01e-14!14;UBERON:0000478!3.26e-10!24;UBERON:0000481!7.20e-09!347;UBERON:0004119!1.41e-08!169;UBERON:0000925!1.41e-08!169;UBERON:0006595!1.41e-08!169;UBERON:0003124!3.36e-08!7;UBERON:0000305!7.62e-08!7;UBERON:0001046!8.15e-08!19;UBERON:0000064!1.50e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.34e-20;24!UBERON:0005631;1.25e-18;10!UBERON:0000158;1.25e-18;10!UBERON:0000305;2.35e-13;7!UBERON:0000922;3.05e-09;49!UBERON:0001987;2.23e-08;4!UBERON:0005409;1.65e-07;22!UBERON:0003124;6.11e-07;3!UBERON:0000920;6.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,3.76e-25,14;UBERON:0000158,3.76e-25,14;UBERON:0000478,6.01e-20,24;UBERON:0003124,9.87e-14,7;UBERON:0000305,4.41e-13,7;UBERON:0004871,2.81e-11,8;UBERON:0001987,2.04e-08,4;UBERON:0004340,2.04e-08,4;UBERON:0004923,6.81e-08,66;UBERON:0004119,3.15e-07,160;UBERON:0000925,3.15e-07,160;UBERON:0006595,3.15e-07,160;UBERON:0000920,5.62e-07,3 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0.446961094427288,0,0,0,0,0,0,12.2327168392896,14.2434168243365,0.37129905888014,0,0,0,0,0,0.123121058076788,1.22400414746552,0.626909442956176,0,0,0.125542639594803,0,0,0,0,0,0.464448369948228,0.919421224478927,0,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329851300186716,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.289693037921647,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.694281003215189,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,3.63257826347835,6.33793516927999,0,0,0,0,0,0.161872944368132,0,0,0.245668634623536,0.103325781175765,3.56400857184616,1.7308685049499,0,0,0,0.625592599359821,0,0.877955241761676,0.612975591598039,1.35214253015937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.69716365721711,0,0.252320850875628,0,0,0,0,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,7.13332943550059,0,0,0,0,0.555530670951178,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,4.3596006883328,0.07333828582095,0,0,0,1.06375246633948,1.04007436911366,0.514414748524284,2.83698264046557,0.799266537048298,0.285955987316295,21.1622426102663,2.46972101034231,0,0,0,0,0,0,0,0,0,0,0,1.42636905040718,0.144781306667579,0.821905290201534,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,1.47229790062968,0.500170521059677,2.17012018959788,1.03985430765404,0.713715955188647,0.630809660135739,1.17141414992713,0.601892199455438,0,2.0694614258501,0,0,0,27.6079632022464,51.1283701478175,0,0,0,3.63753085735511,4.99306318531491,12.7003923198466,0,0,0,0,0.511707249066704,0.482561763430822,1.48418066444991,0,0,0,0.519254429183621,0,16.7994634932355,0.40101294060657,0.0920809889358963,0.114814448164607,0.910455840033585,0.655622074797121,0,0,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,1.62567862526312,0,0,0,0,0.219259876645935,0,0,0,0,3.40035338437484,0.0915694648183434,0,0,0,0,0.386682873168488,0,0.307007349452259,0.275673144969061,0,0,0.170453254832202,9.25933170726069,0.165284915360978,0.192190067365106,0,0.6069466851333,0,0,0,0,0,0,0,0,0.372158369359667,1.58189712359363,0.762520775695299,0,1.28381696410176,0,0,1.07923474549989,0,0.235624804691373,0,0,0,0.48763373908959,0,0,1.9109987597118,0.141405431953713,0,0.551365343546124,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.589494246078727,0,0,0,0,0.379473173765715,0,0.0962221127255121,0,0,2.63602642174982,3.87454835404107,1.68471475667626,0,1.83778720165568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,1.75809815126273,0,0,3.12549761487054,17.4283473858514,16.6300221266278,32.5590344225186,0,0.140669416410513,0,0,1.47787785689595,0.398495976502139,0.552567831062295,0.503865495708552,0,0,0,0,0,0,1.08507746200627,0,0,0,0.278304294485554,0,0,0,7.24999575434793,0,0,0,0.344743373241465,0,0,0,0.120596438625408,0,0.331737779793674,0,0.438770794307945,0,0,1.53900517007594,0,6.45578932286568,0,0,12.4410452295449,3.75550132947635,72.4927295385343,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0.353830258013357,10.3875124638716,0,0,0,0.404406797884062,28.0902176554576,0,0,0,0,0.394584402849391,12.0990716048664,0.91821828489147,1.5796644907122,0,0,1.99396161812156,0.330991955875499,0.627865836814451,0,0,0,0,0,0,1.7472666824203,0,0,0,0,0,0.529536760149002,6.55344148263544,0,0,0,0,0,0,9.39105165036012,0,0,23.1653247113652,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,3.58936512288407,1.79711100449092,0.858452096273142,0.446342914883745,4.36692571163721,0,0,9.37519869455961,6.67568452887448,9.09947842031496,6.20093133542917,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0.236417121897595,1.83591058472493,0.211200673038813,0,0,4.2881719582402,0,0,0,0,0,0,0,0,0.566560457600628,0,99.380166684166,0,0,0,0,0,2.82967749179399,0,0,0,0,0,0,1.0027595760908,0,0,0,0,0,0,0.573409195690071,0.110929051536852,0.248385611765534,0,0,0,0,1.17632909849086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,3.60024988196838,0,0,0,0,0.214441591374926,0,0,0.463044948647668,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.67515953566836,0,0,0,0,0,0,0.327628914576042,0,0,0.123935764259002,0,0,0,0,1.05802783107205,0,0,0,0,0.205116364240755,0.504143392443436,0,0.161475645631851,2.85538840518309,0,0.11796972334774,0,0,0,0,3.38157577597667,1.0529445968896,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0.548257766857182,0.992422356778588,0,0,0,0,0.606965604236632,0,11.7087128614683,0,0,0,0,0,0.111231401892069,0.549451649953598,0.157115589916002,5.0448989396482,4.56579360254748,0,0,1.42953088353313,0.316027223465453,0,10.6053546104573,2.40513409419076,0,0,0,0,0,0,0.846774100381858,0.4582137370881,0,0,0,0,5.85206039914893,1.94228651156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| |||
|short_description=p35@IGF2 | |||
}} |
Latest revision as of 08:44, 17 September 2015
Short description: | p35@IGF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_IGF2_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | 132bp_to_ENST00000416167_5end |
EntrezGene: | IGF2 |
HGNC: | 5466 |
UniProt: | P01344 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.21e-20 | 19 |
amnion mesenchymal stem cell | 1.86e-09 | 5 |
chorionic membrane mesenchymal stem cell | 5.62e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 3.76e-25 | 14 |
membranous layer | 3.76e-25 | 14 |
extraembryonic structure | 6.01e-20 | 24 |
chorion | 9.87e-14 | 7 |
amnion | 4.41e-13 | 7 |
somatic layer of lateral plate mesoderm | 2.81e-11 | 8 |
placenta | 2.04e-08 | 4 |
allantois | 2.04e-08 | 4 |
organ component layer | 6.81e-08 | 66 |
endoderm-derived structure | 3.15e-07 | 160 |
endoderm | 3.15e-07 | 160 |
presumptive endoderm | 3.15e-07 | 160 |
egg chorion | 5.62e-07 | 3 |