FFCP PHASE1:Hg19::chr11:8290343..8290354,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4004 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6641 | |||
|TSSclassifier=strong | |||
|UniProt=E9PSF5 | |||
|association_with_transcript=-80bp_to_ENST00000428101_5end | |||
|cluster_id=chr11:8290343..8290354,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_4_at_LMO1_5end | |||
|id=chr11:8290343..8290354,- | |||
|ontology_enrichment_celltype=CL:0002322!1.21e-16!5;CL:0002319!5.80e-14!25;CL:0000242!1.47e-11!2;CL:0000047!9.51e-11!8;CL:0000133!1.18e-09!59;CL:0000221!1.13e-07!71;CL:0002605!1.30e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.36e-20;25!CL:0002322;1.93e-18;5!CL:0000540;8.09e-16;6!CL:0000404;8.09e-16;6!CL:0000123;1.96e-12;2!CL:0000242;1.96e-12;2!CL:0000047;2.90e-12;2!CL:0002605;1.30e-08;3!CL:0002321;8.83e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.70e-25,8;CL:0002319,1.20e-20,25;CL:0002322,2.52e-18,5;CL:0000540,8.39e-16,6;CL:0000031,8.39e-16,6;CL:0000404,8.39e-16,6;CL:0000133,4.99e-13,59;CL:0000242,1.85e-12,2;CL:0000221,9.70e-11,72;CL:0002605,1.12e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000031;8.09e-16;6!CL:0000133;1.34e-09;59!UBERON:0003056;8.31e-09;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!3.11e-24!86;UBERON:0000073!1.08e-23!94;UBERON:0001016!1.08e-23!94;UBERON:0001017!7.79e-21!82;UBERON:0000956!1.66e-20!25;UBERON:0000203!1.66e-20!25;UBERON:0001869!1.16e-18!32;UBERON:0003075!1.10e-17!86;UBERON:0007284!1.10e-17!86;UBERON:0002020!1.69e-17!34;UBERON:0003528!1.69e-17!34;UBERON:0001893!1.85e-17!34;UBERON:0002346!1.04e-16!90;UBERON:0003056!1.30e-16!61;UBERON:0004121!2.37e-16!169;UBERON:0000924!7.70e-16!173;UBERON:0006601!7.70e-16!173;UBERON:0002619!1.50e-15!22;UBERON:0001049!2.74e-15!57;UBERON:0005068!2.74e-15!57;UBERON:0006241!2.74e-15!57;UBERON:0007135!2.74e-15!57;UBERON:0002791!3.55e-15!33;UBERON:0002616!1.13e-14!59;UBERON:0002780!3.81e-14!41;UBERON:0001890!3.81e-14!41;UBERON:0006240!3.81e-14!41;UBERON:0000955!9.14e-14!69;UBERON:0006238!9.14e-14!69;UBERON:0003080!9.25e-14!42;UBERON:0001950!1.20e-13!20;UBERON:0001871!7.44e-10!7;UBERON:0000966!9.29e-10!5;UBERON:0005388!9.29e-10!5;UBERON:0001802!9.29e-10!5;UBERON:0000033!1.02e-09!123;UBERON:0002021!2.90e-09!5;UBERON:0000153!4.37e-09!129;UBERON:0007811!4.37e-09!129;UBERON:0000200!1.22e-07!6;UBERON:0002771!2.35e-07!3;UBERON:0000988!4.31e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.39e-07,81 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,1.06023814657188,1.04574548582567,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463721619900307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,2.01019518401218,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.1251909307065,0,0,0,0,0,0,0,0,0.936669811613763,2.3187364577732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,0,0,0.319267718114302,0,0.252071696221718,0.138314504928436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,5.57517044577919,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0,0,0.879524133963433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@LMO1 | |||
}} |
Latest revision as of 18:41, 24 September 2015
Short description: | p4@LMO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LMO1_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -80bp_to_ENST00000428101_5end |
EntrezGene: | LMO1 |
HGNC: | 6641 |
UniProt: | E9PSF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.70e-25 | 8 |
neural cell | 1.20e-20 | 25 |
embryonic stem cell | 2.52e-18 | 5 |
neuron | 8.39e-16 | 6 |
neuroblast | 8.39e-16 | 6 |
electrically signaling cell | 8.39e-16 | 6 |
neurectodermal cell | 4.99e-13 | 59 |
Merkel cell | 1.85e-12 | 2 |
ectodermal cell | 9.70e-11 | 72 |
astrocyte of the cerebral cortex | 1.12e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 8.39e-07 | 81 |