FFCP PHASE1:Hg19::chr12:10876282..10876288,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8531 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2428 | |||
|TSSclassifier=strong | |||
|UniProt=P16989 | |||
|association_with_transcript=-329bp_to_NM_001145426,NM_003651,uc001qyt.2,uc001qyu.2_5end | |||
|cluster_id=chr12:10876282..10876288,- | |||
|coexpression_cluster_id=C72 | |||
|description=CAGE_peak_29_at_CSDA_5end | |||
|id=chr12:10876282..10876288,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000236;1.42e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,4.66e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0003104;8.96e-08;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;6.72e-26;1!UBERON:0000026;6.72e-26;1!UBERON:0008784;6.72e-26;1!UBERON:0006058;6.72e-26;1!UBERON:0003663;6.72e-26;1!UBERON:0004256;6.72e-26;1!UBERON:0004708;6.72e-26;1!UBERON:0002101;6.72e-26;1!UBERON:0004709;6.72e-26;1!UBERON:0002529;6.72e-26;1!UBERON:0010538;6.72e-26;1!UBERON:0003661;6.72e-26;1!UBERON:0010890;6.72e-26;1!UBERON:0002471;6.72e-26;1!UBERON:0001383;6.72e-26;1!UBERON:0010758;6.72e-26;1!UBERON:0010707;6.72e-26;1!UBERON:0000978;6.72e-26;1!UBERON:0002103;6.72e-26;1!UBERON:0001665;6.72e-26;1!UBERON:0003823;6.72e-26;1!UBERON:0000154;6.72e-26;1!UBERON:0010709;6.72e-26;1!UBERON:0001134;9.86e-15;16!UBERON:0002036;9.86e-15;16!UBERON:0005090;1.14e-13;2!UBERON:0001630;1.14e-13;2!UBERON:0002385;3.60e-08;31!UBERON:0001015;3.60e-08;31!UBERON:0000383;3.60e-08;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,5.93e-26,1;UBERON:0001389,5.93e-26,1;UBERON:0000026,5.93e-26,1;UBERON:0008784,5.93e-26,1;UBERON:0006058,5.93e-26,1;UBERON:0003663,5.93e-26,1;UBERON:0004256,5.93e-26,1;UBERON:0004708,5.93e-26,1;UBERON:0002101,5.93e-26,1;UBERON:0004709,5.93e-26,1;UBERON:0002529,5.93e-26,1;UBERON:0010538,5.93e-26,1;UBERON:0003661,5.93e-26,1;UBERON:0010890,5.93e-26,1;UBERON:0002471,5.93e-26,1;UBERON:0001383,5.93e-26,1;UBERON:0004357,5.93e-26,1;UBERON:0004347,5.93e-26,1;UBERON:0005420,5.93e-26,1;UBERON:0005732,5.93e-26,1;UBERON:0010758,5.93e-26,1;UBERON:0010707,5.93e-26,1;UBERON:0000978,5.93e-26,1;UBERON:0002103,5.93e-26,1;UBERON:0001665,5.93e-26,1;UBERON:0003823,5.93e-26,1;UBERON:0000154,5.93e-26,1;UBERON:0010709,5.93e-26,1;UBERON:0005733,5.93e-26,1;UBERON:0005730,5.93e-26,1;UBERON:0005090,1.07e-13,2;UBERON:0001630,1.07e-13,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0.661044872784862,0,1.70763890732835,1.17447437874188,0.382273228125229,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34362744548263,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0.10075209822764,0,0,0.272746120590835,0,0.121973706129595,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0.764637207142375,0.569647187174163,0.238231775457789,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167821586975843,0,0.158936578980379,0,0,0,0.865554558968364,0,0,0,0,0,0.104421949505455,0.067401132980677,0,0,0,0,0.242780379534093,0.394584402849391,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0.176512253383001,0,0,0,0,0,0.0801588202515337,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0.199679000498991,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0.327609848846413,0.983091635014877,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0.247871528518004,0,0,0,0,0.352675943690684,0.3062454773532,0,0,0,0,0,0,0,0,0.196295437002051,0,0.183428598521679,0,0,0,0,0,0.20170506870352,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.175871244359621,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0.17071847709395,0.691259661814092,0.860454717640555,0,0,0,0,0,0,0,0,0,1.29485767437579,8.93166419649349,2.3196288626764,0,0,0,0,0,0.329821550236287,0,0,0,0,0,0,0.196308467114945,0,0,0,0.187967835959707,0.0644578879735772,0,0.178553938605658,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.0918948995348449,0.250707539292375,0.303114792872958,1.07185652062471,0,0,0,0,0.129177819672012,0.0620747142958579,0,0.0636471582781649,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p29@CSDA | |||
}} |
Latest revision as of 04:45, 16 September 2015
Short description: | p29@CSDA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_CSDA_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -329bp_to_NM_001145426, NM_003651, uc001qyt.2, uc001qyu.2_5end |
EntrezGene: | CSDA |
HGNC: | 2428 |
UniProt: | P16989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 4.66e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 5.93e-26 | 1 |
soleus muscle | 5.93e-26 | 1 |
appendage | 5.93e-26 | 1 |
lower limb segment | 5.93e-26 | 1 |
multi-limb segment region | 5.93e-26 | 1 |
hindlimb muscle | 5.93e-26 | 1 |
hindlimb zeugopod muscle | 5.93e-26 | 1 |
paired limb/fin | 5.93e-26 | 1 |
limb | 5.93e-26 | 1 |
pelvic appendage | 5.93e-26 | 1 |
limb segment | 5.93e-26 | 1 |
paired limb/fin segment | 5.93e-26 | 1 |
limb muscle | 5.93e-26 | 1 |
pelvic complex muscle | 5.93e-26 | 1 |
zeugopod | 5.93e-26 | 1 |
muscle of leg | 5.93e-26 | 1 |
paired limb/fin bud | 5.93e-26 | 1 |
limb bud | 5.93e-26 | 1 |
pelvic appendage bud | 5.93e-26 | 1 |
limb/fin field | 5.93e-26 | 1 |
subdivision of organism along appendicular axis | 5.93e-26 | 1 |
appendage girdle complex | 5.93e-26 | 1 |
leg | 5.93e-26 | 1 |
hindlimb | 5.93e-26 | 1 |
triceps surae | 5.93e-26 | 1 |
hindlimb zeugopod | 5.93e-26 | 1 |
posterior region of body | 5.93e-26 | 1 |
pelvic complex | 5.93e-26 | 1 |
limb field | 5.93e-26 | 1 |
hindlimb/pelvic fin field | 5.93e-26 | 1 |
muscle structure | 1.07e-13 | 2 |
muscle organ | 1.07e-13 | 2 |