FFCP PHASE1:Hg19::chr12:109901382..109901388,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:109901382..109901388,+ | |||
|description=CAGE_peak_at_chr12:109901382..109901388,+ | |||
|id=chr12:109901382..109901388,+ | |||
|ontology_enrichment_celltype=CL:0002540!1.40e-07!6;CL:0000346!2.33e-07!3;CL:1000428!2.33e-07!3;CL:0002564!5.82e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002540;3.97e-14;6!CL:0002092;7.36e-09;10!CL:0002620;2.03e-08;23!CL:0000135;4.84e-08;3!CL:0000388;4.84e-08;3!CL:0000346;6.78e-08;3!CL:1000428;6.78e-08;3!CL:0000746;6.78e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,3.97e-14,6;CL:0002092,7.36e-09,10;CL:0002620,2.03e-08,23;CL:0000135,4.52e-08,3;CL:0000388,4.52e-08,3;CL:0000346,6.34e-08,3;CL:1000428,6.34e-08,3;CL:0000746,6.78e-08,3;CL:0000513,6.78e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000513;6.78e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000412!2.33e-07!3;UBERON:0001992!2.33e-07!3;UBERON:0002242!5.82e-07!3;UBERON:0003068!5.82e-07!3;UBERON:0002328!5.82e-07!3;UBERON:0004880!5.82e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;4.84e-08;3!UBERON:0000043;4.84e-08;3!UBERON:0007845;4.84e-08;3!UBERON:0000412;6.78e-08;3!UBERON:0001992;6.78e-08;3!UBERON:0002371;1.57e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,4.14e-08,41;UBERON:0007846,4.52e-08,3;UBERON:0000043,4.52e-08,3;UBERON:0007845,4.52e-08,3;UBERON:0000412,6.34e-08,3;UBERON:0001992,6.34e-08,3;UBERON:0002199,2.94e-07,46;UBERON:0002416,2.94e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25095607382472,0.573673241497627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,1.28820270022815,0,0.168776332241266,0,2.01947019395292,0,0,1.77504796258307,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57191197463259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0.234282829985426,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0.61384789315225,0,0,0,0.160853921143607,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25924938732256,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,1.25783950876288,1.77962244319307,0,0,0,0.295710299979268,0,0,0,0,0,0,0.450772826991655,0,0,0.181848659202559,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31087814315709,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:109901382..109901388,+ | |||
}} |
Latest revision as of 04:45, 24 July 2015
Short description: | p@chr12:109901382..109901388, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109901382..109901388, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 3.97e-14 | 6 |
bone marrow cell | 7.36e-09 | 10 |
skin fibroblast | 2.03e-08 | 23 |
fibrocyte | 4.52e-08 | 3 |
tendon cell | 4.52e-08 | 3 |
hair follicle dermal papilla cell | 6.34e-08 | 3 |
stem cell of epidermis | 6.34e-08 | 3 |
cardiac muscle cell | 6.78e-08 | 3 |
cardiac muscle myoblast | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skin of body | 4.14e-08 | 41 |
dense regular connective tissue | 4.52e-08 | 3 |
tendon | 4.52e-08 | 3 |
regular connective tissue | 4.52e-08 | 3 |
dermal papilla | 6.34e-08 | 3 |
papillary layer of dermis | 6.34e-08 | 3 |
integument | 2.94e-07 | 46 |
integumental system | 2.94e-07 | 46 |